Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL021C
Length:
1001
Number of sequences:
5887
Description:
YOL021C DIS3 SGDID:S000005381, Chr XV from 285426-282421, Genome Release 64-1-1, reverse complement, Verified ORF, "Exosome core complex catalytic subunit; possesses both endonuclease and 3'-5' exonuclease activity; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; has similarity to E. coli RNase R and to human DIS3"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q9KNY1    821   RNR_VIBCH Ribonuclease R OS=Vibrio cholerae s...5261e-37     155     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
32P40611    835   RNR_VIBPA Ribonuclease R OS=Vibrio parahaemol...5361e-36     153     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
33P44907    782   RNR_HAEIN Ribonuclease R OS=Haemophilus influ...5683e-35     148     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
34P24276    1250   SSD1_YEAST Protein SSD1 OS=Saccharomyces cere...6152e-33     143     25     43GO:0005935; C:cellular bud neck; IDA:SGD.::GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0048027; F:mRNA 5'-UTR binding; IDA:SGD.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0000900; F:translation repressor activity, nucleic acid binding; IGI:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0008298; P:intracellular mRNA localization; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0060237; P:regulation of fungal-type cell wall organization; IGI:SGD.
35O74454    1066   STS5_SCHPO Protein sts5 OS=Schizosaccharomyce...7602e-30     133     25     40GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:2000115; P:regulation of maintenance of bipolar cell polarity regulating cell shape; IMP:PomBase.
36P47350    725   RNR_MYCGE Ribonuclease R OS=Mycoplasma genita...4291e-29     130     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
37Q8K917    726   RNR_BUCAP Ribonuclease R OS=Buchnera aphidico...4934e-29     128     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
38O94525    1157   YBU1_SCHPO Uncharacterized ribonuclease C609....671.9     36.2     33     45GO:0005829; C:cytosol; IDA:PomBase.
GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
39P75529    726   RNR_MYCPN Ribonuclease R OS=Mycoplasma pneumo...4311e-27     123     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
40Q87IJ9    668   RNB_VIBPA Exoribonuclease 2 OS=Vibrio parahae...4652e-26     119     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
41P56123    644   RNR_HELPY Ribonuclease R OS=pylori). GN=rnr S...4345e-26     118     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
42Q9ZJX9    644   RNR_HELPJ Ribonuclease R OS=Helicobacter pylo...4345e-26     118     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
43P57628    731   RNR_BUCAI Ribonuclease R OS=(Acyrthosiphon pi...4502e-24     114     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
44Q8K9Q5    646   RNB_BUCAP Exoribonuclease 2 OS=Buchnera aphid...3542e-24     113     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
45Q8D7K6    664   RNB_VIBVU Exoribonuclease 2 OS=Vibrio vulnifi...4761e-23     110     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
46B7VSB8    668   RNB_VIBSL Exoribonuclease 2 OS=Vibrio splendi...4401e-23     110     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
47Q7MEL4    664   RNB_VIBVY Exoribonuclease 2 OS=Vibrio vulnifi...4762e-23     110     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
48Q2NST6    644   RNB_SODGM Exoribonuclease 2 OS=Sodalis glossi...4812e-22     107     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
49Q1LTG8    645   RNB_BAUCH Exoribonuclease 2 OS=Baumannia cica...4262e-22     106     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
50A0KFR1    673   RNB_AERHH Exoribonuclease 2 OS=Aeromonas hydr...4266e-22     105     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
51P54084    439   RNR_THIFE Ribonuclease R OS=Thiobacillus ferr...2502e-21     102     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
52Q46363    782   ZAM_SYNY3 Acetazolamide conferring resistance...5936e-21     102     23     41
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
53B7LRZ1    644   RNB_ESCF3 Exoribonuclease 2 OS=Escherichia fe...4227e-21     102     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
54C3LW69    678   RNB_VIBCM Exoribonuclease 2 OS=Vibrio cholera...4538e-21     102     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
55Q9KLE1    678   RNB_VIBCH Exoribonuclease 2 OS=Vibrio cholera...4538e-21     102     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
56D3V184    646   RNB_XENBS Exoribonuclease 2 OS=Xenorhabdus bo...4721e-20     101     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
57P73177    666   RN2H_SYNY3 Uncharacterized ribonuclease sll12...3842e-20     100     25     41
GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
58A5F0G1    678   RNB_VIBC3 Exoribonuclease 2 OS=Vibrio cholera...4542e-20     100     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
59Q9BYK8    2649   PR285_HUMAN Peroxisomal proliferator-activate...4381e-19     99.4     25     41GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003713; F:transcription coactivator activity; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
60B4EW02    647   RNB_PROMH Exoribonuclease 2 OS=Proteus mirabi...4283e-19     96.7     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
61A1AAQ4    644   RNB_ECOK1 Exoribonuclease 2 OS=Escherichia co...4385e-19     95.9     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
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