Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL013C
Length:
551
Number of sequences:
5887
Description:
YOL013C HRD1 SGDID:S000005373, Chr XV from 303035-301380, Genome Release 64-1-1, reverse complement, Verified ORF, "Ubiquitin-protein ligase required for endoplasmic reticulum-associated degradation (ERAD) of misfolded proteins; genetically linked to the unfolded protein response (UPR); regulated through association with Hrd3p; contains an H2 ring finger"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q0VD51    380   RNF13_BOVIN E3 ubiquitin-protein ligase RNF13...810.001     45.1     27     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031902; C:late endosome membrane; ISS:UniProtKB.::GO:0005765; C:lysosomal membrane; ISS:UniProtKB.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.
62Q0II22    313   RN126_BOVIN RING finger protein 126 OS=Bos ta...620.001     45.1     31     47
GO:0008270; F:zinc ion binding; IEA:InterPro.
63Q5RCV8    381   RNF13_PONAB E3 ubiquitin-protein ligase RNF13...810.001     45.1     27     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031902; C:late endosome membrane; ISS:UniProtKB.::GO:0005765; C:lysosomal membrane; ISS:UniProtKB.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.
64O43567    381   RNF13_HUMAN E3 ubiquitin-protein ligase RNF13...810.001     45.1     27     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031902; C:late endosome membrane; ISS:UniProtKB.::GO:0005765; C:lysosomal membrane; ISS:UniProtKB.::GO:0005637; C:nuclear inner membrane; IEA:UniProtKB-SubCell.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.
65Q8GYT9    358   SIS3_ARATH E3 ubiquitin-protein ligase SIS3 O...940.001     45.1     24     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
66Q9SPL2    334   CIP8_ARATH E3 ubiquitin-protein ligase CIP8 O...540.001     44.7     30     48GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016567; P:protein ubiquitination; IDA:TAIR.
67Q63364    707   PJA2_RAT E3 ubiquitin-protein ligase Praja-2 ...550.001     45.4     35     47GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0014069; C:postsynaptic density; IEA:UniProtKB-SubCell.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
GO:0034236; F:protein kinase A catalytic subunit binding; ISS:UniProtKB.::GO:0034237; F:protein kinase A regulatory subunit binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007616; P:long-term memory; IMP:UniProtKB.::GO:0010738; P:regulation of protein kinase A signaling cascade; IMP:UniProtKB.
68Q8BGI1    148   RNF24_MOUSE RING finger protein 24 OS=Mus mus...750.001     42.7     25     43GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
69Q9Y225    148   RNF24_HUMAN RING finger protein 24 OS=Homo sa...750.001     42.7     25     43GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
70Q7ZW78    156   RN181_DANRE E3 ubiquitin-protein ligase RNF18...290.001     42.7     38     69
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
71Q9CQ29    239   RN151_MOUSE RING finger protein 151 OS=Mus mu...380.001     43.9     47     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
72Q09251    409   RN121_CAEEL RING finger protein 121 OS=Caenor...770.001     44.7     27     51GO:0000139; C:Golgi membrane; IDA:WormBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0033017; C:sarcoplasmic reticulum membrane; IDA:WormBase.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:WormBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030968; P:endoplasmic reticulum unfolded protein response; IMP:WormBase.::GO:0030433; P:ER-associated protein catabolic process; IMP:WormBase.
73Q8N4F7    328   RN175_HUMAN RING finger protein 175 OS=Homo s...760.001     44.7     26     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
74Q9EPZ8    682   RN103_RAT E3 ubiquitin-protein ligase RNF103 ...450.002     45.1     38     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
75Q8GT74    241   NIP2_ARATH NEP1-interacting protein 2 OS=Arab...1470.002     43.9     24     42GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.::GO:0031351; C:integral to plastid membrane; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009299; P:mRNA transcription; IPI:TAIR.::GO:0009416; P:response to light stimulus; IEP:TAIR.
76Q96MT1    663   RN145_HUMAN RING finger protein 145 OS=Homo s...720.002     45.1     31     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
77Q6NZ21    419   RNFT1_DANRE RING finger and transmembrane dom...1000.002     44.7     27     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
78Q9Y4L5    304   RN115_HUMAN E3 ubiquitin-protein ligase RNF11...1340.002     44.3     27     39GO:0005829; C:cytosol; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051865; P:protein autoubiquitination; IDA:UniProtKB.
79Q9R1W3    683   RN103_MOUSE E3 ubiquitin-protein ligase RNF10...450.002     45.1     38     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
80Q9ZU51    147   RHA2B_ARATH Probable E3 ubiquitin-protein lig...980.002     42.4     26     45
GO:0004842; F:ubiquitin-protein ligase activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0080167; P:response to karrikin; IEP:TAIR.
81Q8SV35    314   Y733_ENCCU Uncharacterized RING finger protei...800.002     44.3     31     44
GO:0008270; F:zinc ion binding; IEA:InterPro.
82Q6ZSG1    346   RN165_HUMAN RING finger protein 165 OS=Homo s...590.002     44.3     32     49
GO:0008270; F:zinc ion binding; IEA:InterPro.
83O00237    685   RN103_HUMAN E3 ubiquitin-protein ligase RNF10...450.002     44.7     38     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007417; P:central nervous system development; TAS:ProtInc.::GO:0030433; P:ER-associated protein catabolic process; IDA:UniProtKB.
84Q2TBT8    240   RN151_BOVIN RING finger protein 151 OS=Bos ta...380.002     43.9     47     58
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
85E9QAU8    347   RN165_MOUSE RING finger protein 165 OS=Mus mu...590.002     44.3     32     49
GO:0008270; F:zinc ion binding; IEA:InterPro.
86O94400    571   YQF7_SCHPO PHD and RING finger domain-contain...630.002     44.7     33     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
87Q9SYU4    381   PEX10_ARATH Peroxisome biogenesis factor 10 O...810.002     43.9     27     38GO:0005829; C:cytosol; IDA:TAIR.::GO:0005779; C:integral to peroxisomal membrane; IEA:InterPro.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010381; P:attachment of peroxisome to chloroplast; IMP:TAIR.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0006635; P:fatty acid beta-oxidation; IMP:TAIR.::GO:0009853; P:photorespiration; IMP:TAIR.::GO:0016558; P:protein import into peroxisome matrix; IMP:TAIR.
88Q9LF64    362   ATL52_ARATH RING-H2 finger protein ATL52 OS=A...900.002     43.9     26     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
89Q5ZM74    230   RN141_CHICK RING finger protein 141 OS=Gallus...820.003     43.1     29     43
GO:0008270; F:zinc ion binding; IEA:InterPro.
90Q9LUL6    204   ATL61_ARATH Putative RING-H2 finger protein A...1100.003     43.1     28     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
91Q9LZJ6    257   ATL5_ARATH RING-H2 finger protein ATL5 OS=Ara...560.003     43.5     30     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006461; P:protein complex assembly; TAS:TAIR.
records
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