Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL005C
Length:
120
Number of sequences:
5887
Description:
YOL005C RPB11 SGDID:S000005365, Chr XV from 316175-315813, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q9VIZ0    105   RPAC2_DROME Probable DNA-directed RNA polymer...440.11     33.5     34     50GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:UniProtKB.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:UniProtKB.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:UniProtKB.
62A0B533    91   RPOL_METTP DNA-directed RNA polymerase subuni...690.14     33.1     39     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
63B1YAJ2    287   RNZ_THENV Ribonuclease Z OS=Thermoproteus neu...1090.14     34.3     28     44
GO:0016891; F:endoribonuclease activity, producing 5'-phosphomonoesters; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0042779; P:tRNA 3'-trailer cleavage; IEA:InterPro.
64Q978F5    111   RPOL_THEVO DNA-directed RNA polymerase subuni...770.24     32.7     26     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
65Q9HR53    94   RPOL_HALSA DNA-directed RNA polymerase subuni...800.27     32.3     30     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
66B0R4B1    94   RPOL_HALS3 DNA-directed RNA polymerase subuni...800.27     32.3     30     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
67Q3INY0    94   RPOL_NATPD DNA-directed RNA polymerase subuni...710.42     32     31     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
68Q74MN9    96   RPOL_NANEQ DNA-directed RNA polymerase subuni...662.6     29.6     30     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
69P51043    436   CISY_RICTY Citrate synthase OS=Rickettsia typ...452.9     30.8     36     56GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0004108; F:citrate (Si)-synthase activity; IEA:EC.
GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.::GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
70P09948    436   CISY_RICPR Citrate synthase OS=Rickettsia pro...454.6     30     36     53GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0004108; F:citrate (Si)-synthase activity; IEA:EC.
GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.::GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
71O77323    539   TCPH_PLAF7 T-complex protein 1 subunit eta OS...335.8     30     42     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
72P51041    411   CISY_RICCA Citrate synthase OS=Rickettsia can...456.7     29.6     33     56GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0004108; F:citrate (Si)-synthase activity; IEA:EC.
GO:0044262; P:cellular carbohydrate metabolic process; IEA:InterPro.::GO:0006099; P:tricarboxylic acid cycle; IEA:UniProtKB-KW.
73Q9M9L8    924   LONM3_ARATH Lon protease homolog 3, mitochond...456.9     29.6     36     51GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
74Q99207    810   NOP14_YEAST Nucleolar complex protein 14 OS=S...698.6     29.3     26     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0030692; C:Noc4p-Nop14p complex; IPI:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
75P35025    170   RL11_SULAC 50S ribosomal protein L11P OS=NBRC...349.9     28.9     44     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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