Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YOL005C
Length:
120
Number of sequences:
5887
Description:
YOL005C RPB11 SGDID:S000005365, Chr XV from 316175-315813, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II subunit B12.5; part of central core; similar to Rpc19p and bacterial alpha subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31C3MZG6    92   RPOL_SULIA DNA-directed RNA polymerase subuni...660.0000006     47.8     39     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
32Q61IX2    145   RPAC2_CAEBR Probable DNA-directed RNA polymer...910.0000006     48.1     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
33A4YHV0    90   RPOL_METS5 DNA-directed RNA polymerase subuni...760.0000009     47.4     30     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
34Q1RMG8    133   RPAC2_BOVIN DNA-directed RNA polymerases I an...1000.0000009     47.8     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
35C5A5J3    95   RPOL_THEGJ DNA-directed RNA polymerase subuni...850.000001     47     32     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
36Q57832    99   RPOL_METJA DNA-directed RNA polymerase subuni...810.000001     46.6     35     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
37Q96YA7    93   RPOL_SULTO DNA-directed RNA polymerase subuni...630.000003     45.4     37     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
38P57671    95   RPOL_PYRHO DNA-directed RNA polymerase subuni...810.000004     45.4     36     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
39C6A1R5    95   RPOL_THESM DNA-directed RNA polymerase subuni...810.000005     45.1     32     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
40B6YTH7    95   RPOL_THEON DNA-directed RNA polymerase subuni...850.000005     45.1     29     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
41A6VIQ1    96   RPOL_METM7 DNA-directed RNA polymerase subuni...790.000005     45.1     30     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
42A4FZS6    96   RPOL_METM5 DNA-directed RNA polymerase subuni...790.000005     45.1     30     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
43P28000    142   RPAC2_YEAST DNA-directed RNA polymerases I an...1020.000007     45.4     29     48GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006360; P:transcription from RNA polymerase I promoter; IC:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
44O30032    86   RPOL_ARCFU DNA-directed RNA polymerase subuni...750.000008     44.3     32     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
45P46217    90   RPOL_SULAC DNA-directed RNA polymerase subuni...630.00001     43.9     33     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
46A9A836    96   RPOL_METM6 DNA-directed RNA polymerase subuni...790.00002     43.5     29     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
47Q8U4N1    95   RPOL_PYRFU DNA-directed RNA polymerase subuni...810.00002     43.5     35     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
48Q5JE88    94   RPOL_PYRKO DNA-directed RNA polymerase subuni...810.00004     42.7     32     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
49Q9V2M4    95   RPOL_PYRAB DNA-directed RNA polymerase subuni...810.00004     42.4     31     48
GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
50B1L7Q7    98   RPOL_KORCO DNA-directed RNA polymerase subuni...970.00006     42     30     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
51Q0W8P1    93   RPOL_UNCMA DNA-directed RNA polymerase subuni...650.0001     41.6     32     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
52A6URP9    95   RPOL_METVS DNA-directed RNA polymerase subuni...780.0001     41.2     31     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
53Q6M0K9    96   RPOL_METMP DNA-directed RNA polymerase subuni...790.0003     40     29     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
54Q12W27    91   RPOL_METBU DNA-directed RNA polymerase subuni...680.0007     38.9     35     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
55Q5V2C7    94   RPOL_HALMA DNA-directed RNA polymerase subuni...850.0008     38.9     32     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
56Q9HIC5    111   RPOL_THEAC DNA-directed RNA polymerase subuni...960.005     37     26     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
57Q8TZ81    112   RPOL_METKA DNA-directed RNA polymerase subuni...740.008     36.6     32     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
58B9LTT8    92   RPOL_HALLT DNA-directed RNA polymerase subuni...720.058     33.9     31     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
59Q9YEZ1    99   RPOL_AERPE DNA-directed RNA polymerase subuni...880.077     33.9     23     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
60Q8ZW46    92   RPOL_PYRAE DNA-directed RNA polymerase subuni...700.079     33.9     31     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
61Q9VIZ0    105   RPAC2_DROME Probable DNA-directed RNA polymer...440.11     33.5     34     50GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:UniProtKB.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:UniProtKB.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:UniProtKB.
records
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