UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNR038W

Length:

629

Number of sequences:

5887

Description:

YNR038W DBP6 SGDID:S000005321, Chr XIV from 695595-697484, Genome Release 64-1-1, Verified ORF, "Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
451	A6TGG9	421	RHLB_KLEP7 ATP-dependent RNA helicase rhlB OS...	420	5e-26	114	28	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
452	A7TT88	570	ROK1_VANPO ATP-dependent RNA helicase ROK1 OS...	394	6e-26	116	27	47	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
453	A7TPC9	597	DBP9_VANPO ATP-dependent RNA helicase DBP9 OS...	437	6e-26	116	28	46	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
454	Q4X195	547	DBP2_ASPFU ATP-dependent RNA helicase dbp2 OS...	368	6e-26	115	27	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
455	P93008	733	RH21_ARATH DEAD-box ATP-dependent RNA helicas...	453	6e-26	116	24	42	GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
456	B5YY28	421	RHLB_ECO5E ATP-dependent RNA helicase rhlB OS...	418	6e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
457	Q9LUW6	610	RH9_ARATH DEAD-box ATP-dependent RNA helicase...	380	7e-26	116	24	45	GO:0043234; C:protein complex; IDA:TAIR.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.
									GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IMP:TAIR.::GO:0009414; P:response to water deprivation; IMP:TAIR.
458	Q75B50	623	DED1_ASHGO ATP-dependent RNA helicase DED1 OS...	373	7e-26	116	26	47	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
459	Q6CT46	504	DBP3_KLULA ATP-dependent RNA helicase DBP3 OS...	347	7e-26	115	25	48	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
460	Q5ZBH5	594	RH25_ORYSJ DEAD-box ATP-dependent RNA helicas...	381	7e-26	116	28	47
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
461	Q9LUW5	616	RH53_ARATH DEAD-box ATP-dependent RNA helicas...	380	8e-26	116	24	45	GO:0005618; C:cell wall; IDA:TAIR.::GO:0005739; C:mitochondrion; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0043234; C:protein complex; IDA:TAIR.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000373; P:Group II intron splicing; IMP:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.
462	A4QX49	825	DBP7_MAGO7 ATP-dependent RNA helicase DBP7 OS...	443	8e-26	116	26	42	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
463	Q6CUI6	594	DBP9_KLULA ATP-dependent RNA helicase DBP9 OS...	385	8e-26	115	27	45	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
464	Q59N29	631	SPB41_CANAL ATP-dependent rRNA helicase SPB41...	382	8e-26	116	29	47	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
465	Q6C7X8	926	DBP10_YARLI ATP-dependent RNA helicase DBP10 ...	374	8e-26	116	27	46	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
466	Q329V8	421	RHLB_SHIDS ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	26	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
467	B0TJ29	436	RHLB_SHEHH ATP-dependent RNA helicase rhlB OS...	349	8e-26	114	28	46
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
468	A5E058	994	PRP5_LODEL Pre-mRNA-processing ATP-dependent ...	355	8e-26	117	25	46	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
469	Q59NP8	631	SPB42_CANAL ATP-dependent rRNA helicase SPB42...	382	8e-26	116	29	47	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
470	A8G828	428	RHLB_SERP5 ATP-dependent RNA helicase rhlB OS...	417	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
471	Q2NL08	601	DDX55_BOVIN ATP-dependent RNA helicase DDX55 ...	359	8e-26	115	27	45
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
472	A7ESL7	920	DBP10_SCLS1 ATP-dependent RNA helicase dbp10 ...	378	8e-26	116	27	45	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
473	Q3YVI4	421	RHLB_SHISS ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
474	P0A8K0	421	RHLB_SHIFL ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
475	Q1R4F9	421	RHLB_ECOUT ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
476	B6I4B6	421	RHLB_ECOSE ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
477	P0A8J8	421	RHLB_ECOLI ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006401; P:RNA catabolic process; IDA:EcoCyc.
478	B1IWC0	421	RHLB_ECOLC ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
479	P0A8J9	421	RHLB_ECOL6 ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
480	Q0TAU3	421	RHLB_ECOL5 ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
481	A1AHV0	421	RHLB_ECOK1 ATP-dependent RNA helicase rhlB OS...	418	8e-26	114	27	43
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.

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