FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNR024W

Length:

186

Number of sequences:

5887

Description:

YNR024W MPP6 SGDID:S000005307, Chr XIV from 672409-672969, Genome Release 64-1-1, Verified ORF, "Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P53725	186	MPP6_YEAST M-phase phosphoprotein 6 homolog O...	186	3e-128	365	100	100	GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.
									GO:0008266; F:poly(U) RNA binding; IDA:SGD.
									GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0071031; P:nuclear mRNA surveillance of mRNA 3'-end processing; IGI:SGD.::GO:0071030; P:nuclear mRNA surveillance of spliceosomal pre-mRNA splicing; IGI:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IGI:SGD.
2	Q5T8P6	1007	RBM26_HUMAN RNA-binding protein 26 OS=Homo sa...	120	0.62	34.3	28	42
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.
3	Q6NZN0	1012	RBM26_MOUSE RNA-binding protein 26 OS=Mus mus...	124	3.4	32	27	41
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
4	A1SVE8	204	LEUD_PSYIN 3-isopropylmalate dehydratase smal...	61	5.7	30.8	31	52	GO:0009316; C:3-isopropylmalate dehydratase complex; IEA:InterPro.
									GO:0003861; F:3-isopropylmalate dehydratase activity; IEA:EC.
									GO:0009098; P:leucine biosynthetic process; IEA:UniProtKB-KW.

records

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Total records:

1 - 4

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