UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNR003C

Length:

317

Number of sequences:

5887

Description:

YNR003C RPC34 SGDID:S000005286, Chr XIV from 635297-634344, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitment by the preinitiation complex"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P32910	317	RPC6_YEAST DNA-directed RNA polymerase III su...	317	0	656	100	100	GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
									GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2	O94553	301	RPC6_SCHPO Probable DNA-directed RNA polymera...	282	4e-61	203	41	60	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:PomBase.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.
									GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase.
3	Q9H1D9	316	RPC6_HUMAN DNA-directed RNA polymerase III su...	224	1e-26	111	30	52	GO:0005666; C:DNA-directed RNA polymerase III complex; NAS:UniProtKB.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; IMP:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; IMP:UniProtKB.::GO:0006359; P:regulation of transcription from RNA polymerase III promoter; NAS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
4	Q2T9S3	316	RPC6_BOVIN DNA-directed RNA polymerase III su...	224	1e-26	110	30	54	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
5	Q921X6	316	RPC6_MOUSE DNA-directed RNA polymerase III su...	224	2e-26	110	30	52	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045089; P:positive regulation of innate immune response; ISS:UniProtKB.::GO:0032728; P:positive regulation of interferon-beta production; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
6	Q9VD25	293	RPC6_DROME Probable DNA-directed RNA polymera...	238	7e-26	108	28	53	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; NAS:FlyBase.
7	P91529	296	RPC6_CAEEL Probable DNA-directed RNA polymera...	175	6e-23	100	34	57	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
									GO:0000003; P:reproduction; IMP:WormBase.
8	Q86JM3	293	RPC6_DICDI DNA-directed RNA polymerase III su...	229	4e-20	91.7	25	50	GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.
									GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
9	Q8XWD0	308	XERD_RALSO Tyrosine recombinase XerD OS=Ralst...	89	0.28	36.2	29	46	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
10	Q80UW5	1551	MRCKG_MOUSE Serine/threonine-protein kinase M...	153	3.6	33.1	27	43	GO:0031252; C:cell leading edge; ISS:UniProtKB.
									GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
									GO:0031532; P:actin cytoskeleton reorganization; ISS:UniProtKB.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.
11	Q5N1Q1	221	EFTS_SYNP6 Elongation factor Ts OS=(Anacystis...	72	4.8	32	33	57	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
12	Q31K58	221	EFTS_SYNE7 Elongation factor Ts OS=Synechococ...	72	4.8	32	33	57	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
13	Q68CP4	663	HGNAT_HUMAN Heparan-alpha-glucosaminide N-ace...	79	6	32.3	34	49	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IDA:UniProtKB.
									GO:0015019; F:heparan-alpha-glucosaminide N-acetyltransferase activity; IEA:EC.
									GO:0007041; P:lysosomal transport; IDA:UniProtKB.::GO:0051259; P:protein oligomerization; IDA:UniProtKB.

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