UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL339C

Length:

1859

Number of sequences:

5887

Description:

YNL339C YRF1-6 SGDID:S000005283, Chr XIV from 5931-371,6098-6080, Genome Release 64-1-1, reverse complement, Verified ORF, "Helicase encoded by the Y' element of subtelomeric regions, highly expressed in the mutants lacking the telomerase component TLC1; potentially phosphorylated by Cdc28p"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
541	Q747K3	664	UVRB_GEOSL UvrABC system protein B OS=Geobact...	101	4.7	35.8	26	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
542	A7TSV4	1012	MPH1_VANPO ATP-dependent DNA helicase MPH1 OS...	57	4.7	35.8	37	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
543	B7KC96	665	UVRB_CYAP7 UvrABC system protein B OS=29155))...	100	4.7	35.8	24	55	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
544	Q5N3H1	666	UVRB_SYNP6 UvrABC system protein B OS=(Anacys...	71	4.7	35.8	28	59	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
545	Q31QS4	666	UVRB_SYNE7 UvrABC system protein B OS=Synecho...	71	4.7	35.8	28	59	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
546	Q99J87	678	DHX58_MOUSE Probable ATP-dependent RNA helica...	51	4.9	35.8	35	53	GO:0005737; C:cytoplasm; IDA:MGI.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; ISS:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
									GO:0051607; P:defense response to virus; IMP:UniProtKB.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0045824; P:negative regulation of innate immune response; IMP:UniProtKB.::GO:0039534; P:negative regulation of MDA-5 signaling pathway; ISS:UniProtKB.::GO:0039536; P:negative regulation of RIG-I signaling pathway; IMP:UniProtKB.::GO:0032480; P:negative regulation of type I interferon production; IMP:UniProtKB.::GO:1900245; P:positive regulation of MDA-5 signaling pathway; IMP:UniProtKB.::GO:1900246; P:positive regulation of RIG-I signaling pathway; IMP:UniProtKB.::GO:0032481; P:positive regulation of type I interferon production; IMP:UniProtKB.
547	Q5KVB5	658	UVRB_GEOKA UvrABC system protein B OS=Geobaci...	103	4.9	35.8	26	50	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
548	Q1RHI9	661	UVRB_RICBR UvrABC system protein B OS=Rickett...	86	4.9	35.8	26	53	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
549	Q2UBZ5	638	SPB4_ASPOR ATP-dependent rRNA helicase spb4 O...	95	4.9	35.8	28	51	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
550	P44836	1084	HGP3_HAEIN Probable hemoglobin and hemoglobin...	68	4.9	35.8	32	51	GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
									GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; IEA:InterPro.
551	Q6FS54	540	DBP3_CANGA ATP-dependent RNA helicase DBP3 OS...	72	4.9	35.4	28	47	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
552	Q9K6X9	660	UVRB_BACHD UvrABC system protein B OS=9153 / ...	94	5	35.8	26	54	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
553	Q89AF9	602	DEAD_BUCBP Cold-shock DEAD box protein A homo...	106	5.1	35.4	24	46	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
554	Q2H4D0	434	SUB2_CHAGB ATP-dependent RNA helicase SUB2 OS...	144	5.1	35.4	24	44	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
555	Q2NJ77	667	UVRB_AYWBP UvrABC system protein B OS=Aster y...	106	5.1	35.8	25	50	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
556	Q6H7S2	508	RH8_ORYSJ DEAD-box ATP-dependent RNA helicase...	97	5.1	35.4	29	49	GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
557	P0CAI2	550	VF602_ASFWA Protein B602L OS=(ASFV). GN=War-0...	67	8.4	35	37	48	GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.
558	C5BV49	698	UVRB_BEUC1 UvrABC system protein B OS=Beutenb...	94	5.2	35.4	27	53	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
559	Q86XP3	938	DDX42_HUMAN ATP-dependent RNA helicase DDX42 ...	271	5.3	35.8	24	40	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0008104; P:protein localization; IDA:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; IMP:UniProtKB.
560	Q5R7D1	942	DDX42_PONAB ATP-dependent RNA helicase DDX42 ...	362	5.3	35.8	23	38	GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0008104; P:protein localization; ISS:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; ISS:UniProtKB.
561	Q54CU4	11103	COLA_DICDI Colossin-A OS=Dictyostelium discoi...	114	5.3	35.8	24	42	GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
562	Q0ILZ4	628	RH9_ORYSJ DEAD-box ATP-dependent RNA helicase...	76	5.3	35.4	26	50
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
563	P56981	658	UVRB_BACCA UvrABC system protein B OS=Bacillu...	103	5.3	35.4	26	50	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
564	Q55170	669	UVRB_SYNY3 UvrABC system protein B OS=Synecho...	72	5.4	35.4	26	58	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
565	Q21H92	343	RSGA_SACD2 Putative ribosome biogenesis GTPas...	149	5.5	35	23	43
									GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
566	Q9ZA21	1077	HGPA_HAEIF Hemoglobin and hemoglobin-haptoglo...	62	5.5	35.8	35	52	GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
									GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; IEA:InterPro.
567	A7LFZ6	1657	DCL4_ORYSJ Endoribonuclease Dicer homolog 4 O...	111	5.6	35.8	26	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.
									GO:0010492; P:maintenance of shoot apical meristem identity; IMP:UniProtKB.::GO:0009944; P:polarity specification of adaxial/abaxial axis; IMP:UniProtKB.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IDA:UniProtKB.::GO:0048608; P:reproductive structure development; IMP:UniProtKB.
568	A7Z985	661	UVRB_BACA2 UvrABC system protein B OS=Bacillu...	103	5.6	35.4	28	50	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
569	Q95YF3	430	CGH1_CAEEL ATP-dependent RNA helicase cgh-1 O...	109	5.7	35.4	27	49	GO:0000932; C:cytoplasmic mRNA processing body; IDA:WormBase.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006916; P:anti-apoptosis; IMP:WormBase.::GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010467; P:gene expression; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007052; P:mitotic spindle organization; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0016071; P:mRNA metabolic process; TAS:WormBase.::GO:0017148; P:negative regulation of translation; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
570	Q6BQ61	477	RRP3_DEBHA ATP-dependent rRNA helicase RRP3 O...	72	5.7	35.4	31	47	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
571	Q2EG98	2201	PK1L3_MOUSE Polycystic kidney disease protein...	167	5.7	35.8	22	46	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
									GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.
									GO:0006812; P:cation transport; IDA:BHF-UCL.::GO:0071468; P:cellular response to acidity; IDA:BHF-UCL.::GO:0001581; P:detection of chemical stimulus involved in sensory perception of sour taste; IDA:BHF-UCL.::GO:0007218; P:neuropeptide signaling pathway; IEA:InterPro.

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