Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...2930.0006     45.8     19     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
962Q13347    325   EIF3I_HUMAN Eukaryotic translation initiation...1693.8     33.5     19     41GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
963O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...762.9     33.9     28     50GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
964P18851    423   GBB_YEAST Guanine nucleotide-binding protein ...1390.0006     45.8     26     47GO:0005834; C:heterotrimeric G-protein complex; IDA:SGD.::GO:0005937; C:mating projection; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0031684; P:heterotrimeric G-protein complex cycle; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IGI:SGD.::GO:0010525; P:regulation of transposition, RNA-mediated; IMP:SGD.
965A2QI22    490   YTM1_ASPNC Ribosome biogenesis protein ytm1 O...1160.039     40     24     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
966A5DB75    1266   SEC31_PICGU Protein transport protein SEC31 O...1780.0006     46.2     24     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
967Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...1654.1     33.9     18     39
968Q6BIR1    297   SEC13_DEBHA Protein transport protein SEC13 O...1081.4     34.7     31     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
969Q9JIT3    764   TLE3_RAT Transducin-like enhancer protein 3 O...1095.3     33.5     18     42GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
970Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...1540.012     41.6     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
971Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...2650.006     42.7     23     38
972B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...2650.006     42.7     23     38
973P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...891.6     35     24     46GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
974O43071    558   PRP17_SCHPO Pre-mRNA-processing factor 17 OS=...1151.9     34.7     21     40GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
975Q9VKQ3    420   WDR12_DROME Ribosome biogenesis protein WDR12...2980.0007     45.4     20     38GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
976Q08122    772   TLE3_MOUSE Transducin-like enhancer protein 3...1095.5     33.1     18     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
977Q04726    772   TLE3_HUMAN Transducin-like enhancer protein 3...1095.9     33.1     18     42GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
978O13046    1127   WDHD1_XENLA WD repeat and HMG-box DNA-binding...1862.6     34.3     19     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
979Q5RBW3    925   CORO7_PONAB Coronin-7 OS=Pongo abelii (Sumatr...1260.036     40.4     25     41GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
980Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...1697.1     32.7     19     41GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
981O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...2302.1     34.7     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
982Q4FZW5    360   SEH1A_XENLA Nucleoporin seh1-A OS=Xenopus lae...1440.0008     45.1     28     44GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051315; P:attachment of spindle microtubules to kinetochore involved in mitotic sister chromatid segregation; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007080; P:mitotic metaphase plate congression; ISS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; ISS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
983A1CH75    488   YTM1_ASPCL Ribosome biogenesis protein ytm1 O...1160.097     38.9     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
984Q0U2T3    681   MDV1_PHANO Mitochondrial division protein 1 O...870.88     35.8     23     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
985O42858    398   SWD1_SCHPO Set1 complex component swd1 OS=Sch...1592.8     33.9     19     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
986Q2UGK1    487   YTM1_ASPOR Ribosome biogenesis protein ytm1 O...1380.002     43.9     27     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
987Q9N4A7    313   SEC13_CAEEL Protein SEC13 homolog OS=Caenorha...1170.0009     45.1     31     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0000910; P:cytokinesis; IMP:UniProtKB.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0051169; P:nuclear transport; IC:UniProtKB.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
988Q24246    663   DYIN_DROME Cytoplasmic dynein 1 intermediate ...3580.0009     45.4     21     36GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0045503; F:dynein light chain binding; IPI:FlyBase.::GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051642; P:centrosome localization; IMP:FlyBase.::GO:0016482; P:cytoplasmic transport; IMP:FlyBase.::GO:0001754; P:eye photoreceptor cell differentiation; IGI:FlyBase.::GO:0007291; P:sperm individualization; IMP:FlyBase.::GO:0007051; P:spindle organization; IMP:FlyBase.
989Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...2130.003     43.5     20     36
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
990Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...804.8     33.5     29     45
991Q4IBR4    1046   HIR1_GIBZE Protein HIR1 OS=(Wheat head blight...2050.14     38.5     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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