Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841A8QB65    433   WDR12_BRUMA Ribosome biogenesis protein WDR12...2700.0008     45.4     22     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
842P53024    289   SEC13_PICPG Protein transport protein SEC13 O...1728     32.3     23     45GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
843O93277    609   WDR1_CHICK WD repeat-containing protein 1 OS=...1541.9     34.7     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
844Q9VKK2    989   WDR59_DROME WD repeat-containing protein 59 h...2460.00009     48.9     23     39
845Q5ZKU8    369   PK1IP_CHICK p21-activated protein kinase-inte...1241.6     34.7     21     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
846Q2UF60    1273   SEC31_ASPOR Protein transport protein sec31 O...2540.038     40.4     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
847Q9W1J3    655   GAD1_DROME Gastrulation defective protein 1 h...1565.3     33.1     21     37
848P33750    489   DCA13_YEAST Protein SOF1 OS=Saccharomyces cer...781.8     34.7     26     54GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
849Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1530.037     39.7     23     42GO:0005737; C:cytoplasm; ISS:UniProtKB.
850Q5ACW8    853   HIR1_CANAL Protein HIR1 OS=Candida albicans (...1290.13     38.5     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
851Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...1400.008     42.4     26     49GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
852B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...2520.0001     48.1     20     35
853Q10272    446   IPI3_SCHPO Pre-rRNA-processing protein crb3/i...734.1     33.5     26     47GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
854Q4PHV3    587   IPI3_USTMA Pre-rRNA-processing protein IPI3 O...1650.0001     48.1     22     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
855Q5SUS0    1030   FBW10_MOUSE F-box/WD repeat-containing protei...1590.15     38.5     21     42
856A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...821.7     35     26     49
857Q75BS2    295   SEC13_ASHGO Protein transport protein SEC13 O...1810.95     35.4     23     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
858Q62441    773   TLE4_MOUSE Transducin-like enhancer protein 4...2534.1     33.5     17     32GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
859P0CS44    757   MDV1_CRYNJ Mitochondrial division protein 1 O...1950.19     38.1     22     38GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
860P0CS45    757   MDV1_CRYNB Mitochondrial division protein 1 O...1950.19     38.1     22     38GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
861Q04727    773   TLE4_HUMAN Transducin-like enhancer protein 4...2534.3     33.5     17     32GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
862P38968    1273   SEC31_YEAST Protein transport protein SEC31 O...2650.14     38.5     21     40GO:0030127; C:COPII vesicle coat; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0043332; C:mating projection tip; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0090114; P:COPII-coated vesicle budding; IDA:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
863Q6BYU4    985   HIR1_DEBHA Protein HIR1 OS=0083 / IGC 2968) (...1480.19     38.1     19     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
864Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...1170.0003     47     24     48
865Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...2280.087     38.5     21     37
866O42478    772   TLE4_XENLA Transducin-like enhancer protein 4...2535.1     33.5     17     32GO:0017053; C:transcriptional repressor complex; IPI:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IGI:UniProtKB.
GO:0001707; P:mesoderm formation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
867P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1210.072     38.9     23     46GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
868Q9JJA4    423   WDR12_MOUSE Ribosome biogenesis protein WDR12...1250.33     37     27     47GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0007219; P:Notch signaling pathway; IPI:MGI.
869Q5BDU4    1031   HIR1_EMENI Protein hir1 OS=194 / M139) (Asper...770.081     39.3     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
870Q0VC24    423   WDR12_BOVIN Ribosome biogenesis protein WDR12...1700.068     39.3     26     45GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
871Q75C99    423   HAT2_ASHGO Histone acetyltransferase type B s...2060.0001     47.8     20     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
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