UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL317W

Length:

465

Number of sequences:

5887

Description:

YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
811	Q6FNV4	298	SC131_CANGA Protein transport protein SEC13-1...	63	0.47	36.2	37	51	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
812	Q66J51	325	EIF3I_XENLA Eukaryotic translation initiation...	169	1.4	35	19	41	GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
									GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
813	Q94BR4	523	PR19A_ARATH Pre-mRNA-processing factor 19 hom...	227	0.007	42.4	23	40	GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
									GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
									GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
814	Q6CSZ5	302	SEC13_KLULA Protein transport protein SEC13 O...	111	5.2	33.1	25	45	GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
									GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
815	Q5FVA9	368	RAE1L_XENTR mRNA export factor OS=Xenopus tro...	125	0.00005	48.9	26	47	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
816	A7RM20	321	EIF3I_NEMVE Eukaryotic translation initiation...	349	0.001	44.7	20	40	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
817	Q6KAU8	623	A16L2_MOUSE Autophagy-related protein 16-2 OS...	218	0.36	37	18	34	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
818	Q8MYE8	425	PAAF1_DICDI Probable proteasomal ATPase-assoc...	157	3.6	33.5	19	32	GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
819	Q86H45	901	ELP2_DICDI Probable elongator complex protein...	215	0.00005	49.3	26	45	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008023; C:transcription elongation factor complex; ISS:dictyBase.
									GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
820	Q6BIR9	394	CIAO1_DEBHA Probable cytosolic iron-sulfur pr...	153	0.00005	48.9	27	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
821	Q1DR81	473	CIAO1_COCIM Probable cytosolic iron-sulfur pr...	134	6.2	33.1	22	38
822	Q9H7D7	661	WDR26_HUMAN WD repeat-containing protein 26 O...	238	0.042	40	22	39	GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:HPA.
823	Q9LRZ0	1131	TPR2_ARATH Topless-related protein 2 OS=Arabi...	156	0.00006	49.3	28	48	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005515; F:protein binding; IPI:TAIR.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
824	P57737	925	CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...	126	0.046	40	25	40	GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
825	Q9UT73	576	YIPH_SCHPO Uncharacterized WD repeat-containi...	152	0.083	38.9	26	42	GO:0043234; C:protein complex; NAS:PomBase.
									GO:0000132; P:establishment of mitotic spindle orientation; ISS:PomBase.
826	B7PY76	425	WDR12_IXOSC Ribosome biogenesis protein WDR12...	160	0.001	45.1	26	50	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
827	O94411	509	MFR2_SCHPO Meiotic fizzy-related protein 2 OS...	175	0.00006	48.9	19	47	GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
									GO:0007126; P:meiosis; IEA:UniProtKB-KW.
828	Q9JHB4	367	WDR31_MOUSE WD repeat-containing protein 31 O...	173	0.13	38.1	17	39
829	Q54MT0	331	EIF3I_DICDI Eukaryotic translation initiation...	212	0.00006	48.5	23	42	GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
									GO:0006446; P:regulation of translational initiation; ISS:dictyBase.
830	Q86A97	400	TSSC1_DICDI Protein tssc1 homolog OS=Dictyost...	100	0.00007	48.5	37	55	GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
831	A5E2R6	415	CIAO1_LODEL Probable cytosolic iron-sulfur pr...	157	0.0002	47.4	27	44	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
832	P53011	349	SEH1_YEAST Nucleoporin SEH1 OS=Saccharomyces ...	261	0.00007	48.5	25	41	GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0031080; C:Nup107-160 complex; IDA:SGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
									GO:0006406; P:mRNA export from nucleus; TAS:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; TAS:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
833	P40217	347	EIF3I_YEAST Eukaryotic translation initiation...	214	0.00007	48.5	22	43	GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
									GO:0002188; P:translation reinitiation; IMP:SGD.
834	A6ZMK5	347	EIF3I_YEAS7 Eukaryotic translation initiation...	214	0.00007	48.5	22	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
835	Q91VU6	549	DCA11_MOUSE DDB1- and CUL4-associated factor ...	319	0.00007	48.9	19	37	GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
836	Q8WQ85	1704	VILD_DICDI Villidin OS=Dictyostelium discoide...	136	0.00007	49.3	29	54	GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0045335; C:phagocytic vesicle; IBA:RefGenome.
									GO:0051015; F:actin filament binding; IBA:RefGenome.::GO:0005543; F:phospholipid binding; IEA:InterPro.
									GO:0007010; P:cytoskeleton organization; IEA:InterPro.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051707; P:response to other organism; TAS:dictyBase.
837	Q26544	301	WSL17_SCHMA WD repeat-containing protein SL1-...	207	0.092	38.5	22	41
838	P90648	732	MHCKB_DICDI Myosin heavy chain kinase B OS=Di...	102	0.16	38.1	21	37	GO:0005826; C:actomyosin contractile ring; IDA:dictyBase.
									GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; IDA:dictyBase.::GO:0045159; F:myosin II binding; IPI:dictyBase.
									GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.::GO:0018107; P:peptidyl-threonine phosphorylation; IDA:dictyBase.::GO:0046777; P:protein autophosphorylation; IDA:dictyBase.
839	Q9UT57	608	CFD1_SCHPO Probable cytosolic Fe-S cluster as...	170	7.1	32.7	22	43	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
									GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
									GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
840	Q84JM4	1108	TPR3_ARATH Topless-related protein 3 OS=Arabi...	245	0.35	37.4	20	37	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005515; F:protein binding; IPI:TAIR.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
841	A8QB65	433	WDR12_BRUMA Ribosome biogenesis protein WDR12...	270	0.0008	45.4	22	40	GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
									GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.

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