Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...2316.3     32.7     16     39GO:0005737; C:cytoplasm; ISS:UniProtKB.
662Q06078    939   UTP21_YEAST U3 small nucleolar RNA-associated...1850.000002     54.3     24     44GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042274; P:ribosomal small subunit biogenesis; IC:SGD.::GO:0006364; P:rRNA processing; IGI:SGD.
663Q6CSI1    408   HAT2_KLULA Histone acetyltransferase type B s...2160.000002     53.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
664Q6FVD3    840   HIR1_CANGA Protein HIR1 OS=NRRL Y-65) (Yeast)...1270.53     36.6     20     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
665B4NW98    322   EIF3I_DROYA Eukaryotic translation initiation...3080.54     36.2     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
666P0CS36    435   HAT2_CRYNJ Histone acetyltransferase type B s...1750.001     45.1     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
667P0CS37    435   HAT2_CRYNB Histone acetyltransferase type B s...1750.001     45.1     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
668O74845    564   YCY9_SCHPO Uncharacterized WD repeat-containi...1731.1     35.4     20     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0034967; C:Set3 complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0016575; P:histone deacetylation; ISS:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:PomBase.
669Q2GSM6    290   SEC13_CHAGB Protein transport protein SEC13 O...2460.023     40.4     24     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
670Q8N1V2    620   WDR16_HUMAN WD repeat-containing protein 16 O...1820.00004     49.7     22     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:UniProtKB.
671Q6RI45    1802   BRWD3_HUMAN Bromodomain and WD repeat-contain...2560.59     36.6     21     40
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
672A5DJX5    507   LIS1_PICGU Nuclear distribution protein PAC1 ...1120.0007     45.4     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
673B3MVL6    322   EIF3I_DROAN Eukaryotic translation initiation...3080.053     39.3     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
674Q8TEB1    546   DCA11_HUMAN DDB1- and CUL4-associated factor ...3120.000003     53.5     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
675Q29L19    326   EIF3I_DROPS Eukaryotic translation initiation...730.7     35.8     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
676B4GSH1    326   EIF3I_DROPE Eukaryotic translation initiation...730.7     35.8     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
677B4Q354    326   EIF3I_DROSI Eukaryotic translation initiation...3080.78     35.8     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
678Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...1160.0004     46.6     24     49GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
679Q5ZL33    350   STRAP_CHICK Serine-threonine kinase receptor-...2006.7     32.7     18     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005102; F:receptor binding; ISS:AgBase.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:AgBase.::GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; ISS:AgBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
680P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...893.4     33.9     28     39GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
681P39014    640   MET30_YEAST F-box protein MET30 OS=Saccharomy...685.7     33.1     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0019344; P:cysteine biosynthetic process; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000087; P:M phase of mitotic cell cycle; IMP:SGD.::GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IMP:SGD.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; IMP:SGD.::GO:0046685; P:response to arsenic-containing substance; IDA:SGD.::GO:0046686; P:response to cadmium ion; IDA:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
682P38262    535   SIF2_YEAST SIR4-interacting protein SIF2 OS=S...2610.000003     53.1     19     40GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.
683Q6DRF9    387   WDR55_DANRE WD repeat-containing protein 55 O...1540.14     38.1     25     41GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0001654; P:eye development; IMP:UniProtKB.::GO:0060465; P:pharynx development; IMP:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.::GO:0048794; P:swim bladder development; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:UniProtKB.
684Q8VZS9    475   FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabido...1860.014     41.2     23     42GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:TAIR.
685Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...1650.79     35.8     21     39GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
686P47025    714   MDV1_YEAST Mitochondrial division protein 1 O...930.63     36.2     26     45GO:0005741; C:mitochondrial outer membrane; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.
687P87060    775   POP1_SCHPO WD repeat-containing protein pop1 ...2920.002     44.3     19     39GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
688P07834    779   CDC4_YEAST Cell division control protein 4 OS...3150.000004     53.1     20     37GO:0016363; C:nuclear matrix; IDA:SGD.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IGI:SGD.::GO:0007126; P:meiosis; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
689Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...3120.000004     52.8     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
690Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...2380.09     38.9     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
691A6ZQL5    714   MDV1_YEAS7 Mitochondrial division protein 1 O...930.63     36.2     26     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
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