Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631P32479    840   HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...2442.5     34.3     21     37GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
632Q803V5    326   LST8_DANRE Target of rapamycin complex subuni...1650.025     40.4     19     39GO:0005737; C:cytoplasm; ISS:UniProtKB.
633Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...1230.000001     53.9     28     53GO:0005737; C:cytoplasm; ISS:UniProtKB.
634Q60584    422   FBXW2_MOUSE F-box/WD repeat-containing protei...920.02     40.8     24     46GO:0005737; C:cytoplasm; IDA:MGI.
635Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1130.86     35.8     22     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
636B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1130.86     35.8     22     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
637Q9JJ66    499   CDC20_MOUSE Cell division cycle protein 20 ho...3280.000001     54.3     20     41GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; IDA:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; IDA:UniProtKB.::GO:0040020; P:regulation of meiosis; IGI:MGI.
638Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...920.076     38.9     23     46
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
639Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...920.074     39.3     23     46
640Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...3120.000001     54.7     20     39
641Q0USG2    443   CIAO1_PHANO Probable cytosolic iron-sulfur pr...2520.11     38.5     20     39
642A2AHJ4    1799   BRWD3_MOUSE Bromodomain and WD repeat-contain...2560.39     37     20     40
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.
643Q7QJ33    428   WDR12_ANOGA Ribosome biogenesis protein WDR12...1460.04     40     26     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
644Q71UF4    425   RBBP7_RAT Histone-binding protein RBBP7 OS=Ra...2080.11     38.5     20     43GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
645Q60973    425   RBBP7_MOUSE Histone-binding protein RBBP7 OS=...2080.12     38.5     20     43GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; TAS:MGI.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
646Q4R304    425   RBBP7_MACFA Histone-binding protein RBBP7 OS=...2080.11     38.5     20     43GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
647Q16576    425   RBBP7_HUMAN Histone-binding protein RBBP7 OS=...2080.11     38.5     20     43GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0016581; C:NuRD complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0070370; P:cellular heat acclimation; IDA:UniProtKB.::GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; TAS:ProtInc.::GO:0030308; P:negative regulation of cell growth; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
648Q5F201    620   WDR16_MOUSE WD repeat-containing protein 16 O...1630.00002     50.8     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
649Q3SWX8    425   RBBP7_BOVIN Histone-binding protein RBBP7 OS=...2080.1     38.5     20     43GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.::GO:0016581; C:NuRD complex; ISS:UniProtKB.
GO:0070370; P:cellular heat acclimation; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0030308; P:negative regulation of cell growth; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
650B3N4C7    326   EIF3I_DROER Eukaryotic translation initiation...3080.38     36.6     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
651Q9DCJ1    326   LST8_MOUSE Target of rapamycin complex subuni...2490.14     38.1     19     40
GO:0030838; P:positive regulation of actin filament polymerization; IMP:MGI.::GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IMP:MGI.::GO:0032314; P:regulation of Rac GTPase activity; IMP:MGI.
652B4I195    326   EIF3I_DROSE Eukaryotic translation initiation...3080.43     36.6     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
653O02195    326   EIF3I_DROME Eukaryotic translation initiation...3080.43     36.6     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
654Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...2298.1     32.7     21     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
655O43818    475   U3IP2_HUMAN U3 small nucleolar RNA-interactin...911.3     35     23     44GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005732; C:small nucleolar ribonucleoprotein complex; TAS:ProtInc.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; TAS:ProtInc.
656A1DHW6    689   SCONB_NEOFI Probable E3 ubiquitin ligase comp...1131.1     35.4     22     39
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
657Q54SD4    423   RBBD_DICDI Probable histone-binding protein r...1350.049     39.7     21     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
658P27133    445   COROA_DICDI Coronin-A OS=Dictyostelium discoi...1324.6     33.5     25     44GO:0042995; C:cell projection; IDA:dictyBase.::GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051015; F:actin filament binding; IDA:dictyBase.
GO:0007015; P:actin filament organization; ISS:dictyBase.::GO:0006928; P:cellular component movement; IMP:dictyBase.::GO:0000910; P:cytokinesis; IMP:dictyBase.::GO:0006972; P:hyperosmotic response; IEP:dictyBase.::GO:0030835; P:negative regulation of actin filament depolymerization; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:dictyBase.::GO:0006909; P:phagocytosis; IEP:dictyBase.::GO:0009617; P:response to bacterium; IEP:dictyBase.
659P41318    303   LST8_YEAST Target of rapamycin complex subuni...1470.5     36.2     21     44GO:0010008; C:endosome membrane; IDA:SGD.::GO:0031234; C:extrinsic to internal side of plasma membrane; IDA:SGD.::GO:0000139; C:Golgi membrane; IDA:SGD.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:SGD.::GO:0031931; C:TORC1 complex; IPI:SGD.::GO:0031932; C:TORC2 complex; IPI:SGD.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030295; F:protein kinase activator activity; IMP:SGD.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:SGD.::GO:0031929; P:TOR signaling cascade; IMP:SGD.::GO:0006810; P:transport; IMP:SGD.
660B2RZ17    454   FBXW2_RAT F-box/WD repeat-containing protein ...920.027     40.4     24     46
661Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...2316.3     32.7     16     39GO:0005737; C:cytoplasm; ISS:UniProtKB.
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