Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q7S7N3    446   HAT2_NEUCR Histone acetyltransferase type B s...2170.011     41.6     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
542Q05B17    678   WDR48_XENTR WD repeat-containing protein 48 O...2360.008     42.4     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
543Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...1501.7     35     20     43GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
544Q8BH57    676   WDR48_MOUSE WD repeat-containing protein 48 O...1370.053     39.7     22     46GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
545Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1560.17     38.1     22     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
546Q21215    325   GBLP_CAEEL Guanine nucleotide-binding protein...2160.005     42.4     22     42GO:0030424; C:axon; IDA:WormBase.::GO:0044297; C:cell body; IDA:WormBase.::GO:0005813; C:centrosome; IDA:WormBase.::GO:0030426; C:growth cone; IDA:WormBase.::GO:0000776; C:kinetochore; IDA:WormBase.::GO:0005635; C:nuclear envelope; IDA:WormBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048675; P:axon extension; IMP:WormBase.::GO:0051304; P:chromosome separation; IMP:WormBase.::GO:0000281; P:cytokinesis after mitosis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0008045; P:motor axon guidance; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040038; P:polar body extrusion after meiotic divisions; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0033365; P:protein localization to organelle; IMP:WormBase.::GO:0030334; P:regulation of cell migration; IMP:WormBase.
547Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...880.76     36.2     23     40GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
548Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...2020.0008     45.4     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
549C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...1281.3     35     23     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
550Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...1281.3     35     23     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
551Q54JS5    1023   WDR24_DICDI WD repeat-containing protein 24 h...1660.0004     46.6     23     49
552Q9XW12    337   CIAO1_CAEEL Probable cytosolic iron-sulfur pr...2760.00000008     57.4     21     42
GO:0005515; F:protein binding; IPI:IntAct.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0000003; P:reproduction; IMP:WormBase.
553Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...2310.00004     49.7     20     44
554Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...1180.28     37.4     18     41
555O94289    713   LUB1_SCHPO Ubiquitin homeostasis protein lub1...1561.6     35     23     38GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0043130; F:ubiquitin binding; ISS:PomBase.
GO:0006281; P:DNA repair; ISS:PomBase.::GO:0016574; P:histone ubiquitination; NAS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:PomBase.
556Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...1640.12     38.1     19     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
557Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...1640.12     38.1     19     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
558Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...1890.15     38.1     17     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
559P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1063.4     33.9     22     52GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
560A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...2640.02     40.8     21     39GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
561B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...1830.0000009     54.3     25     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
562O22466    424   MSI1_SOLLC WD-40 repeat-containing protein MS...2170.0000001     57.8     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
563B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...1280.62     36.2     23     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
564A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...2220.0000001     57.4     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
565A2RRU3    528   UTP15_RAT U3 small nucleolar RNA-associated p...2020.0003     47     24     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
566O13286    556   SRW1_SCHPO WD repeat-containing protein srw1 ...1453.5     33.9     23     42GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IC:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.
567Q75C26    328   CIAO1_ASHGO Probable cytosolic iron-sulfur pr...2410.89     35.4     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
568P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...3710.066     39.7     19     39
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
569A6RUL1    335   EIF3I_BOTFB Eukaryotic translation initiation...2220.0000001     57     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
570Q5ZLG9    973   WDR59_CHICK WD repeat-containing protein 59 O...1480.046     40     24     41
571Q8LPL5    481   FZR3_ARATH Protein FIZZY-RELATED 3 OS=Arabido...1610.004     43.1     22     43
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
records
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