Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511Q9DAJ4    315   WDR83_MOUSE WD repeat domain-containing prote...1950.000003     52.8     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
512Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1900.00000002     59.3     24     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
513A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...1051.7     34.7     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
514Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...1271.8     34.7     22     43
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
515Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1240.011     41.6     27     50GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
516Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...980.3     37.4     24     37GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
517Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...2310.00000002     60.5     21     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
518Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...2440.000002     54.3     20     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
519Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...2130.000001     53.9     24     40GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
520Q6PJI9    974   WDR59_HUMAN WD repeat-containing protein 59 O...1480.083     39.3     24     41
521Q4WEI5    436   HAT2_ASPFU Histone acetyltransferase type B s...2350.00000002     60.1     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
522Q8L3Z8    483   FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabido...3360.00000002     60.1     21     37
GO:0005515; F:protein binding; IPI:TAIR.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016049; P:cell growth; IMP:TAIR.::GO:0042023; P:DNA endoreduplication; IMP:TAIR.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010091; P:trichome branching; IMP:TAIR.
523Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...1000.32     37.4     26     45GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
524Q74ZN0    825   HIR1_ASHGO Protein HIR1 OS=Y-1056) (Yeast) (E...2340.00000002     60.1     23     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
525Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...1900.000003     52.8     26     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
526Q9UM11    496   FZR_HUMAN Fizzy-related protein homolog OS=Ho...1620.092     38.9     22     45GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051488; P:activation of anaphase-promoting complex activity; IDA:UniProtKB.::GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IDA:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0045732; P:positive regulation of protein catabolic process; IGI:UniProtKB.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0070979; P:protein K11-linked ubiquitination; TAS:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.
527Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1900.00000003     59.3     24     45
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
528Q4R2Z6    622   WDR48_MACFA WD repeat-containing protein 48 O...2360.021     41.2     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
529A7MB12    519   UTP15_BOVIN U3 small nucleolar RNA-associated...1950.054     39.7     20     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
530Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...2660.006     42.7     21     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
531Q5RF51    357   SNR40_PONAB U5 small nuclear ribonucleoprotei...1900.0000002     56.6     24     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
532O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1180.74     36.2     17     41
533Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...1410.08     39.3     16     44GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
534Q54D08    304   LST8_DICDI Protein LST8 homolog OS=Dictyostel...850.54     36.2     18     46GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0031932; C:TORC2 complex; IPI:dictyBase.
GO:0007190; P:activation of adenylate cyclase activity; IMP:dictyBase.::GO:0032148; P:activation of protein kinase B activity; IMP:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IMP:dictyBase.::GO:0043520; P:regulation of myosin II filament assembly; IMP:dictyBase.
535Q5F3K4    678   WDR48_CHICK WD repeat-containing protein 48 O...2360.033     40.4     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
536Q5RAW8    677   WDR48_PONAB WD repeat-containing protein 48 O...2360.029     40.4     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
537Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...1870.003     43.5     19     40
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
538Q32PG3    677   WDR48_BOVIN WD repeat-containing protein 48 O...2360.029     40.4     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
539Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...2360.028     40.4     20     42GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
540Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...1560.27     37.4     22     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
541Q7S7N3    446   HAT2_NEUCR Histone acetyltransferase type B s...2170.011     41.6     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
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