Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...680.22     37.7     32     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
422Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...2650.0000004     55.5     23     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
423D4D8P3    663   SCONB_TRIVH Probable E3 ubiquitin ligase comp...680.23     37.7     32     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
424B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...2600.0000000007     64.7     20     43
425Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...1840.006     42.4     19     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
426Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...2400.00000001     59.7     23     42
427C5JD40    473   LIS1_AJEDS Nuclear distribution protein PAC1 ...2130.0000000008     64.3     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
428C5GVJ9    473   LIS1_AJEDR Nuclear distribution protein PAC1 ...2130.0000000008     64.3     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
429P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...1770.01     41.6     22     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
430B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...2480.0000000008     64.7     23     43
431B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...2480.0000000008     64.7     23     43
432Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...2950.0000004     56.2     20     41GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
433P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...2340.0004     46.2     21     38
434Q6NVS5    445   DCA13_XENTR DDB1- and CUL4-associated factor ...2590.0000000009     64.3     23     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
435Q7ZX22    780   WDR24_XENLA WD repeat-containing protein 24 O...2520.0000000009     64.7     23     43
436B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...2190.000000003     62     24     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
437Q0CXH9    336   EIF3I_ASPTN Eukaryotic translation initiation...2250.0000000009     63.5     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
438B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...2050.022     40.8     20     39
439Q873A1    1256   SEC31_NEUCR Protein transport protein sec-31 ...1380.25     37.7     25     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
440Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1740.00003     50.1     20     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
441Q8CFJ9    790   WDR24_MOUSE WD repeat-containing protein 24 O...1651.2     35.4     21     45
442Q6CMA2    333   CIAO1_KLULA Probable cytosolic iron-sulfur pr...2610.000000001     63.5     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
443Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...2930.06     39.7     19     38GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
444Q6P1V3    422   WSB1_XENTR WD repeat and SOCS box-containing ...1760.21     37.7     22     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
445Q3ULA2    605   FBW1A_MOUSE F-box/WD repeat-containing protei...3310.00001     51.2     21     37GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0008013; F:beta-catenin binding; IDA:BHF-UCL.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0045309; F:protein phosphorylated amino acid binding; IDA:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:BHF-UCL.
GO:0060444; P:branching involved in mammary gland duct morphogenesis; IMP:MGI.::GO:0071407; P:cellular response to organic cyclic compound; IDA:MGI.::GO:0033598; P:mammary gland epithelial cell proliferation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:BHF-UCL.::GO:0051726; P:regulation of cell cycle; IMP:MGI.::GO:0043122; P:regulation of I-kappaB kinase/NF-kappaB cascade; IMP:MGI.::GO:0061136; P:regulation of proteasomal protein catabolic process; IDA:MGI.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
446Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...581     35.8     24     52GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
447B5X212    333   CIO1B_SALSA Probable cytosolic iron-sulfur pr...1870.021     40.4     21     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
448Q05583    330   CIAO1_YEAST Cytosolic iron-sulfur protein ass...1680.002     43.5     21     43GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
449A6ZYM0    330   CIAO1_YEAS7 Probable cytosolic iron-sulfur pr...1680.002     43.5     21     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
450Q25189    317   GBLP_HYDVU Guanine nucleotide-binding protein...1550.33     37     19     45
451Q5SRY7    542   FBW1B_MOUSE F-box/WD repeat-containing protei...2680.0002     47.4     21     37GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0042347; P:negative regulation of NF-kappaB import into nucleus; IMP:UniProtKB.::GO:0042753; P:positive regulation of circadian rhythm; IMP:UniProtKB.::GO:0045862; P:positive regulation of proteolysis; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006470; P:protein dephosphorylation; IDA:UniProtKB.::GO:0031648; P:protein destabilization; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
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