Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...2100.009     41.6     22     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
362Q39836    325   GBLP_SOYBN Guanine nucleotide-binding protein...2660.000002     53.5     24     43
363Q5ZK69    392   PAAF1_CHICK Proteasomal ATPase-associated fac...2630.0003     46.2     19     37GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
364Q4WX90    340   EIF3I_ASPFU Eukaryotic translation initiation...2210.00000000008     67     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
365B0XYC8    340   EIF3I_ASPFC Eukaryotic translation initiation...2210.00000000008     67     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
366P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...2740.00000000008     67.4     26     42GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
367B6HP56    458   LIS11_PENCW Nuclear distribution protein nudF...2080.0000009     54.7     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
368B4P7Q3    335   CIAO1_DROYA Probable cytosolic iron-sulfur pr...2100.007     42.4     23     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
369Q95RJ9    700   EBI_DROME F-box-like/WD repeat-containing pro...1810.003     43.5     22     41GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0017053; C:transcriptional repressor complex; IGI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0070491; F:repressing transcription factor binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0042676; P:compound eye cone cell fate commitment; TAS:FlyBase.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:FlyBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IPI:GOC.::GO:0007219; P:Notch signaling pathway; TAS:FlyBase.::GO:0042461; P:photoreceptor cell development; IMP:FlyBase.::GO:0031065; P:positive regulation of histone deacetylation; IDA:FlyBase.::GO:0045572; P:positive regulation of imaginal disc growth; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IDA:FlyBase.::GO:0042058; P:regulation of epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0030162; P:regulation of proteolysis; TAS:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.::GO:0035220; P:wing disc development; IMP:FlyBase.
370Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...1790.003     43.5     21     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
371Q7K1Y4    335   CIAO1_DROME Probable cytosolic iron-sulfur pr...2100.007     42.4     23     42
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
372A8PWQ8    356   CIAO1_MALGO Probable cytosolic iron-sulfur pr...430.48     36.2     37     58
373Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...1630.42     37     23     46GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
374B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...2100.02     40.8     22     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
375P38129    798   TAF5_YEAST Transcription initiation factor TF...310.62     36.2     42     71GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IC:SGD.
376B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1690.021     40.4     23     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
377Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...2450.03     40     20     42GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
378O14727    1248   APAF_HUMAN Apoptotic protease-activating fact...2610.005     43.1     22     43GO:0043293; C:apoptosome; IDA:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008656; F:cysteine-type endopeptidase activator activity involved in apoptotic process; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008635; P:activation of cysteine-type endopeptidase activity involved in apoptotic process by cytochrome c; IDA:UniProtKB.::GO:0006952; P:defense response; IEA:InterPro.::GO:0008629; P:induction of apoptosis by intracellular signals; TAS:Reactome.::GO:0097193; P:intrinsic apoptotic signaling pathway; TAS:UniProtKB.::GO:0007399; P:nervous system development; TAS:ProtInc.
379Q40507    375   GBB3_TOBAC Guanine nucleotide-binding protein...1220.42     36.6     22     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
380A1CJY4    340   EIF3I_ASPCL Eukaryotic translation initiation...2210.0000000002     65.9     23     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
381P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...1220.49     36.2     22     40
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
382O18640    318   GBLP_DROME Guanine nucleotide-binding protein...2680.000006     51.6     23     41GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
383Q2UQ34    335   EIF3I_ASPOR Eukaryotic translation initiation...1233.5     33.5     22     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
384Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...1650.021     40.8     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
385P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...2660.000001     53.9     24     41
386Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...800.008     42.4     25     44GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
387Q4V7A0    305   WDR61_RAT WD repeat-containing protein 61 OS=...1760.00002     49.7     21     43GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
388P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...1220.49     36.2     22     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
389P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1070.0002     47     19     47GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
390Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...1852.8     34.3     23     42GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
391Q9C4Z6    326   GPLPB_ARATH Guanine nucleotide-binding protei...2660.000000002     62.4     25     44GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
records
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