Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...3120.0000000002     65.5     21     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
242P49846    704   TAF5_DROME Transcription initiation factor TF...792.1     34.7     24     47GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
243O15736    612   TIPD_DICDI Protein tipD OS=Dictyostelium disc...633.5     33.9     32     52GO:0034274; C:Atg12-Atg5-Atg16 complex; ISS:dictyBase.
GO:0019776; F:Atg8 ligase activity; ISS:dictyBase.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0016236; P:macroautophagy; ISS:dictyBase.
244Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...3220.000000005     61.2     22     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
245Q8K450    639   SPG16_MOUSE Sperm-associated antigen 16 prote...640.83     35.8     30     53GO:0035085; C:cilium axoneme; IDA:UniProtKB.::GO:0035086; C:flagellar axoneme; IDA:MGI.::GO:0005874; C:microtubule; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:MGI.
246Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...1351.4     35     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
247P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...1710.44     36.6     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
248Q9BVA0    655   KTNB1_HUMAN Katanin p80 WD40-containing subun...1450.00001     51.2     26     47GO:0008352; C:katanin complex; TAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0008017; F:microtubule binding; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0031117; P:positive regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0006605; P:protein targeting; NAS:UniProtKB.
249Q8BG40    658   KTNB1_MOUSE Katanin p80 WD40-containing subun...1450.00001     51.6     26     47GO:0030424; C:axon; IDA:MGI.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0045502; F:dynein binding; IDA:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
250B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...2190.0000000002     65.5     25     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
251Q5ZLK1    445   DCA13_CHICK DDB1- and CUL4-associated factor ...2910.0000000000004     74.7     23     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
252Q1DPU4    340   EIF3I_COCIM Eukaryotic translation initiation...2230.0000000000004     73.6     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
253C4JPW9    459   LIS12_UNCRE Nuclear distribution protein PAC1...1010.09     38.9     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
254A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...430.69     35.8     33     65
255Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1130.00002     50.4     20     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
256P16649    713   TUP1_YEAST General transcriptional corepresso...3150.0000001     58.2     21     38GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
257P62884    312   GBLP_LEIIN Guanine nucleotide-binding protein...1850.039     39.7     24     44
258P62883    312   GBLP_LEICH Guanine nucleotide-binding protein...1850.039     39.7     24     44
259Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...2540.00000008     58.2     22     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
260Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...681.8     34.7     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
261O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...2930.0000000000007     74.3     23     40GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
262O13615    473   PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=...1880.0000001     57.4     22     38GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
263Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...2540.0000001     57.4     22     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
264B2VWG7    461   LIS1_PYRTR Nuclear distribution protein PAC1 ...2350.00000004     59.3     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
265Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...1110.00001     51.2     21     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
266Q25306    312   GBLP_LEIMA Guanine nucleotide-binding protein...1850.088     38.5     23     44
267Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1130.00002     50.4     20     48GO:0005730; C:nucleolus; IDA:HPA.
268Q9D994    303   WDR38_MOUSE WD repeat-containing protein 38 O...1650.038     39.7     22     41
269P56094    682   TUP1_KLULA General transcriptional corepresso...1630.0002     47.4     22     43
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
270B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...3370.000000000002     72.4     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
271D4DG66    461   LIS1_TRIVH Nuclear distribution protein PAC1 ...2320.001     45.1     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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