Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL317W
Length:
465
Number of sequences:
5887
Description:
YNL317W PFS2 SGDID:S000005261, Chr XIV from 40619-42016, Genome Release 64-1-1, Verified ORF, "Integral subunit of the pre-mRNA cleavage and polyadenylation factor (CPF) complex; plays an essential role in mRNA 3'-end formation by bridging different processing factors and thereby promoting the assembly of the processing complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...1220.001     45.1     23     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
212D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...2390.0000000005     65.1     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
213Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...2980.00000004     58.9     19     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
214Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...2280.00000001     60.5     25     42GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
215Q8CIE6    1224   COPA_MOUSE Coatomer subunit alpha OS=Mus musc...2180.00000002     60.8     25     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
216C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...2420.0000000002     66.2     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
217C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...2420.0000000002     66.2     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
218Q7RY30    453   LIS11_NEUCR Nuclear distribution protein pac1...2390.0000000001     66.6     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
219Q803X4    445   DCA13_DANRE DDB1- and CUL4-associated factor ...737     32.7     26     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
220P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...2120.0005     45.4     21     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
221O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...2190.0008     45.1     20     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
222C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...1650.028     40.4     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
223Q7SZM9    519   TB1RA_XENLA F-box-like/WD repeat-containing p...2160.0006     45.8     23     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
224Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...1720.011     42     23     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
225P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...2440.002     43.9     22     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
226O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...1720.011     42     23     41GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
227O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2440.002     43.9     22     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
228Q5RBZ2    342   MEP50_PONAB Methylosome protein 50 OS=Pongo a...2420.00000000000008     75.9     27     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
229P78706    604   RCO1_NEUCR Transcriptional repressor rco-1 OS...2390.00000000001     70.5     22     42
GO:0048315; P:conidium formation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
230B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...3180.00001     51.2     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
231Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...1860.0007     45.4     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
232Q7S7L4    486   LIS12_NEUCR Nuclear distribution protein pac1...1970.32     37     18     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
233P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...1710.34     37     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
234Q9BQA1    342   MEP50_HUMAN Methylosome protein 50 OS=Homo sa...1270.005     42.7     23     42GO:0005829; C:cytosol; TAS:Reactome.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IGI:MGI.
GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IGI:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034660; P:ncRNA metabolic process; TAS:Reactome.::GO:0000387; P:spliceosomal snRNP assembly; TAS:Reactome.
235P87177    922   YB1C_SCHPO Uncharacterized WD repeat-containi...1555.5     33.5     24     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
236B8PD53    427   LIS12_POSPM Nuclear distribution protein PAC1...870.0007     45.4     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
237A1CUD6    467   LIS11_ASPCL Nuclear distribution protein nudF...2480.000000005     61.6     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
238Q5ZIU8    657   KTNB1_CHICK Katanin p80 WD40-containing subun...1760.0000000000004     75.5     23     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
239Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...1550.003     43.5     23     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
240Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...911.3     35.4     24     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
241Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...3120.0000000002     65.5     21     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
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