Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL290W
Length:
340
Number of sequences:
5887
Description:
YNL290W RFC3 SGDID:S000005234, Chr XIV from 86218-87240, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991Q1B9Q9    357   RUVB_MYCSS Holliday junction ATP-dependent DN...560.59     35.4     38     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
992A1UFA4    357   RUVB_MYCSK Holliday junction ATP-dependent DN...560.59     35.4     38     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
993A3PYW5    357   RUVB_MYCSJ Holliday junction ATP-dependent DN...560.59     35.4     38     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
994A4TBQ5    357   RUVB_MYCGI Holliday junction ATP-dependent DN...560.59     35.4     38     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
995Q3SX23    852   LONP2_BOVIN Lon protease homolog 2, peroxisom...1500.61     35.8     27     43GO:0009295; C:nucleoid; ISS:RefGenome.::GO:0005782; C:peroxisomal matrix; ISS:RefGenome.
GO:0005524; F:ATP binding; ISS:RefGenome.::GO:0004176; F:ATP-dependent peptidase activity; ISS:RefGenome.::GO:0043565; F:sequence-specific DNA binding; ISS:RefGenome.::GO:0004252; F:serine-type endopeptidase activity; ISS:RefGenome.
GO:0006515; P:misfolded or incompletely synthesized protein catabolic process; ISS:RefGenome.
996Q9SCN8    815   CD48D_ARATH Cell division control protein 48 ...1590.62     35.8     28     43GO:0005856; C:cytoskeleton; IEA:UniProtKB-KW.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0009524; C:phragmoplast; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.
997B8D065    630   FTSH_HALOH ATP-dependent zinc metalloprotease...1960.62     35.8     28     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
998P34732    794   SEC18_CANAX Vesicular-fusion protein SEC18 OS...461.9     34.3     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
999Q07590    780   SAV_SULAC Protein SAV OS=NBRC 15157 / NCIMB 1...222.5     33.9     68     73
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
1000O05209    745   VAT_THEAC VCP-like ATPase OS=NBRC 15155 / AMR...786.1     32.3     33     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
records
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