Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL290W
Length:
340
Number of sequences:
5887
Description:
YNL290W RFC3 SGDID:S000005234, Chr XIV from 86218-87240, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121P35251    1148   RFC1_HUMAN Replication factor C subunit 1 OS=...2420.0000000000001     75.9     29     45GO:0005663; C:DNA replication factor C complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; TAS:ProtInc.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.::GO:0008047; F:enzyme activator activity; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0007004; P:telomere maintenance via telomerase; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
122C3NE95    405   RFCL_SULIY Replication factor C large subunit...2270.0000000000001     75.1     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
123C3MQ13    405   RFCL_SULIL Replication factor C large subunit...2270.0000000000001     75.1     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
124Q8TZC5    510   RFCL_METKA Replication factor C large subunit...2440.0000000000001     75.1     28     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
125C3MVD2    405   RFCL_SULIM Replication factor C large subunit...2270.0000000000002     74.7     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
126C3N5N1    405   RFCL_SULIA Replication factor C large subunit...2270.0000000000002     74.7     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
127P06710    643   DPO3X_ECOLI DNA polymerase III subunit tau OS...2270.0000000000002     75.1     26     46GO:0043846; C:DNA polymerase III, DnaX complex; IDA:EcoliWiki.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:EcoliWiki.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0030337; F:DNA polymerase processivity factor activity; IDA:EcoliWiki.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006261; P:DNA-dependent DNA replication; IDA:EcoliWiki.
128P74876    642   DPO3X_SALTY DNA polymerase III subunit tau OS...3230.0000000000002     74.7     24     44GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
129Q89A95    370   DPO3X_BUCBP DNA polymerase III subunit gamma ...2570.0000000000002     73.9     24     48GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
130Q50739    452   Y2559_MYCTU Uncharacterized AAA domain-contai...2260.0000000000002     74.3     27     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
131A3DNV8    423   RFCL_STAMF Replication factor C large subunit...2120.0000000000002     73.9     29     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
132C3NHF4    405   RFCL_SULIN Replication factor C large subunit...2270.0000000000003     73.9     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
133P0AAZ4    447   RARA_ECOLI Replication-associated recombinati...2370.0000000000003     73.9     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
134P0AAZ5    447   RARA_ECOL6 Replication-associated recombinati...2370.0000000000003     73.9     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
135P0AAZ6    447   RARA_ECO57 Replication-associated recombinati...2370.0000000000003     73.9     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
136Q75JU2    876   WRIP1_DICDI ATPase WRNIP1 OS=Dictyostelium di...2170.0000000000003     74.3     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
137Q9YBS5    479   RFCL_AERPE Replication factor C large subunit...2160.0000000000004     73.6     31     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
138P35600    986   RFC1_DROME Replication factor C subunit 1 OS=...2380.0000000000006     73.2     24     45GO:0005663; C:DNA replication factor C complex; NAS:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; NAS:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
139P38630    861   RFC1_YEAST Replication factor C subunit 1 OS=...2860.0000000000007     73.2     25     45GO:0005663; C:DNA replication factor C complex; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0000278; P:mitotic cell cycle; IMP:SGD.
140Q54MH9    1401   RFC1_DICDI Probable replication factor C subu...2280.0000000000009     73.2     26     45GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
141O57852    855   RFCS_PYRHO Replication factor C small subunit...490.000000000002     72     55     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
142P35601    1131   RFC1_MOUSE Replication factor C subunit 1 OS=...2440.000000000002     71.6     28     45GO:0005663; C:DNA replication factor C complex; IEA:InterPro.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003689; F:DNA clamp loader activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
143P45262    446   RARA_HAEIN Replication-associated recombinati...2230.000000000003     70.9     29     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
144P43746    688   DPO3X_HAEIN DNA polymerase III subunit tau/ga...2410.000000000004     70.5     23     46GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
145Q8U4J3    852   RFCS_PYRFU Replication factor C small subunit...490.000000000005     70.5     53     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
146Q9V2G4    1437   RFCS_PYRAB Replication factor C small subunit...490.000000000007     70.5     53     71
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
147Q5JHP2    866   RFCS_PYRKO Replication factor C small subunit...490.00000000001     69.7     51     73
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
148O13984    504   WRIP1_SCHPO ATPase WRNIP1 homolog C26H5.02c O...2750.00000000001     69.3     25     46GO:0005634; C:nucleus; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0043142; F:single-stranded DNA-dependent ATPase activity; ISS:PomBase.
GO:0033567; P:DNA replication, Okazaki fragment processing; ISS:PomBase.::GO:0000731; P:DNA synthesis involved in DNA repair; ISS:PomBase.
149Q91XU0    660   WRIP1_MOUSE ATPase WRNIP1 OS=Mus musculus (Mo...2300.00000000001     69.3     29     45GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000731; P:DNA synthesis involved in DNA repair; ISS:UniProtKB.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; ISS:UniProtKB.
150Q8CG07    660   WRIP1_RAT ATPase WRNIP1 OS=Rattus norvegicus ...2300.00000000002     68.9     29     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000731; P:DNA synthesis involved in DNA repair; ISS:UniProtKB.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; ISS:UniProtKB.
151A4WGV3    422   RFCL_PYRAR Replication factor C large subunit...2340.00000000003     67.8     26     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
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