Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL284C-B
Length:
1755
Number of sequences:
5887
Description:
YNL284C-B YNL284C-B SGDID:S000007387, Chr XIV from 100926-96964,102232-100928, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4380     766     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
62P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4380     766     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
63Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4350     765     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
64P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4350     764     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
65P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4350     764     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
66P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4350     764     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
67P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4350     764     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
68P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4380     763     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
69P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4380     763     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
70Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4380     763     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
71Q12217    440   YB12A_YEAST Transposon Ty1-BR Gag polyprotein...4380     762     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
72P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4350     759     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
73P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4350     759     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
74P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4350     759     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
75Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4350     759     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
76Q12441    440   YD12A_YEAST Transposon Ty1-DR3 Gag polyprotei...4380     758     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
77P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4350     757     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78Q92392    440   YO11A_YEAST Transposon Ty1-OL Gag polyprotein...4350     752     84     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
79P0C2I4    478   YH11A_YEAST Transposon Ty1-H Gag polyprotein ...4760     742     78     82GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
80Q12439    438   YO21A_YEAST Transposon Ty2-OR1 Gag polyprotei...4351e-119     389     49     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
81Q12392    438   YD21A_YEAST Transposon Ty2-DR1 Gag polyprotei...4351e-118     386     49     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
82P25383    438   YC21A_YEAST Transposon Ty2-C Gag polyprotein ...4356e-117     382     48     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
83Q12260    438   YB21A_YEAST Transposon Ty2-B Gag polyprotein ...4351e-116     381     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
84P0C2J6    438   YL22A_YEAST Transposon Ty2-LR2 Gag polyprotei...4352e-116     380     48     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
85Q99303    438   YD23A_YEAST Transposon Ty2-DR3 Gag polyprotei...4355e-116     379     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
86Q03483    438   YD22A_YEAST Transposon Ty2-DR2 Gag polyprotei...4357e-116     379     48     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
87Q12293    438   YO22A_YEAST Transposon Ty2-OR2 Gag polyprotei...4352e-115     377     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
88P0C2J4    438   YL21A_YEAST Transposon Ty2-LR1 Gag polyprotei...4353e-115     377     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
89P0C2J2    438   YG21A_YEAST Transposon Ty2-GR1 Gag polyprotei...4354e-115     377     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
90P0CX62    438   YG22A_YEAST Transposon Ty2-GR2 Gag polyprotei...4354e-115     377     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
91P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4354e-115     377     48     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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