FGC: Single Locus Summary

UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL284C-A

Length:

440

Number of sequences:

5887

Description:

YNL284C-A YNL284C-A SGDID:S000007386, Chr XIV from 102232-100910, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
91	Q6FV37	1484	INO80_CANGA Putative DNA helicase INO80 OS=NR...	78	2.4	34.3	31	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
92	A1IGU5	675	ARH37_HUMAN Rho guanine nucleotide exchange f...	60	2.8	34.3	35	58	GO:0005737; C:cytoplasm; IEA:InterPro.
									GO:0005089; F:Rho guanyl-nucleotide exchange factor activity; IEA:InterPro.
									GO:0035023; P:regulation of Rho protein signal transduction; IEA:InterPro.
93	A1A546	240	ISX_MOUSE Intestine-specific homeobox OS=Mus ...	104	3.2	33.5	27	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
									GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
94	Q6LPQ6	466	SYN_PHOPR Asparagine--tRNA ligase OS=Photobac...	100	3.6	33.5	24	42	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0004816; F:asparagine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
									GO:0006421; P:asparaginyl-tRNA aminoacylation; IEA:InterPro.
95	Q9LXA9	315	BH061_ARATH Transcription factor bHLH61 OS=Ar...	48	4.1	33.1	40	54	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
									GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
96	P46973	164	HIT1_YEAST Protein HIT1 OS=Saccharomyces cere...	56	4.2	32.3	36	52	GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
									GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.

records

‹‹

››

Total records:

91 - 96

Elimate unknown annotation:

Filter for keyword on hit description:

Select upper E value:

Select lower bit score:

Select lower %idenity value:

Select lower %positive value:

Taxonomic division:

Lower limit on hit length:

Lower limit on alignment length::