Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL284C-A
Length:
440
Number of sequences:
5887
Description:
YNL284C-A YNL284C-A SGDID:S000007386, Chr XIV from 102232-100910, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12391    440   YN11A_YEAST Transposon Ty1-NL1 Gag polyprotei...4400     916     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
2Q12112    1755   YN11B_YEAST Transposon Ty1-NL1 Gag-Pol polypr...4350     908     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
3Q12470    440   YN12A_YEAST Transposon Ty1-NL2 Gag polyprotei...4400     801     88     92GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
4Q04215    440   YM13A_YEAST Transposon Ty1-MR1 Gag polyprotei...4400     790     88     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
5Q03964    440   YD17A_YEAST Transposon Ty1-DR2 Gag polyprotei...4400     790     88     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
6P0CX58    440   YP12A_YEAST Transposon Ty1-PR1 Gag polyprotei...4400     787     87     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
7P0CX57    440   YA11A_YEAST Transposon Ty1-A Gag polyprotein ...4400     787     87     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
8Q12266    440   YB11A_YEAST Transposon Ty1-BL Gag polyprotein...4400     786     88     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
9P47099    440   YJ12A_YEAST Transposon Ty1-JR2 Gag polyprotei...4400     783     87     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
10Q12085    440   YG11A_YEAST Transposon Ty1-GR1 Gag polyprotei...4400     783     87     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
11Q12485    440   YG12A_YEAST Transposon Ty1-GR2 Gag polyprotei...4400     781     87     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
12Q03856    440   YD11A_YEAST Transposon Ty1-DR1 Gag polyprotei...4400     774     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
13O74302    440   YD13A_YEAST Transposon Ty1-DR4 Gag polyprotei...4400     773     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
14P0CX73    440   YP11A_YEAST Transposon Ty1-PL Gag polyprotein...4400     772     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
15P0CX72    440   YL12A_YEAST Transposon Ty1-LR2 Gag polyprotei...4400     772     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
16P0CX71    440   YE11A_YEAST Transposon Ty1-ER1 Gag polyprotei...4400     772     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
17P0CX70    440   YD15A_YEAST Transposon Ty1-DR6 Gag polyprotei...4400     772     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
18P0CX69    440   YM14A_YEAST Transposon Ty1-MR2 Gag polyprotei...4400     770     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
19P0CX68    440   YL11A_YEAST Transposon Ty1-LR1 Gag polyprotei...4400     770     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
20P0CX67    440   YG13A_YEAST Transposon Ty1-GR3 Gag polyprotei...4400     770     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
21P0CX66    440   YE12A_YEAST Transposon Ty1-ER2 Gag polyprotei...4400     770     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
22P0CX65    440   YD14A_YEAST Transposon Ty1-DR5 Gag polyprotei...4400     770     86     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
23P08405    440   TY1A_YEASX Transposon TyH3 Gag polyprotein OS...4400     769     85     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
24P0CX76    440   YM12A_YEAST Transposon Ty1-ML2 Gag polyprotei...4400     768     85     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
25P0CX75    440   YL13A_YEAST Transposon Ty1-LR3 Gag polyprotei...4400     768     85     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
26P0CX74    440   YJ11A_YEAST Transposon Ty1-JR1 Gag polyprotei...4400     768     85     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
27Q6Q5H1    440   YP14A_YEAST Transposon Ty1-PR3 Gag polyprotei...4400     768     85     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
28P0CX60    440   YP13A_YEAST Transposon Ty1-PR2 Gag polyprotei...4400     768     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
29P0CX59    440   YO12A_YEAST Transposon Ty1-OR Gag polyprotein...4400     768     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
30Q04706    440   YM11A_YEAST Transposon Ty1-ML1 Gag polyprotei...4400     768     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
31P0C2I8    440   YL14A_YEAST Transposon Ty1-LR4 Gag polyprotei...4400     766     85     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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