Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL255C
Length:
153
Number of sequences:
5887
Description:
YNL255C GIS2 SGDID:S000005199, Chr XIV from 167790-167329, Genome Release 64-1-1, reverse complement, Verified ORF, "Translational activator for mRNAs with internal ribosome entry sites; associates with polysomes and binds to a specific subset of mRNAs; ortholog of human ZNF9/CNBP, a gene involved in myotonic dystrophy type 2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241P27484    214   GRP2_NICSY Glycine-rich protein 2 OS=Nicotian...517.1     30     35     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
242P23090    529   GAG_MLVDU Gag polyprotein OS=Duplan murine le...301.5     32.3     43     53GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019068; P:virion assembly; IEA:InterPro.
243Q5EB47    195   LN28A_XENTR Protein lin-28 homolog A OS=Xenop...451.6     32     40     51GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB.
244Q8JHC4    195   LN28A_XENLA Protein lin-28 homolog A OS=Xenop...451.8     32     40     51GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB.
245Q9CG80    710   TOP1_LACLA DNA topoisomerase 1 OS=lactis). GN...982.2     32     27     38GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
246P11269    537   GAG_MLVRD Gag polyprotein OS=Radiation murine...302.3     32     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
247P03346    433   GAG_HTLV2 Gag polyprotein OS=Human T-cell leu...392.5     31.6     38     51GO:0019013; C:viral nucleocapsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
248P03332    538   GAG_MLVMS Gag polyprotein OS=Moloney murine l...302.5     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
249Q8L7S8    748   RH3_ARATH DEAD-box ATP-dependent RNA helicase...192.8     31.6     53     74GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
250Q0DM51    758   RH3_ORYSJ DEAD-box ATP-dependent RNA helicase...152.8     31.6     60     80GO:0005634; C:nucleus; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
251Q27ID9    536   GAG_XMRV6 Gag polyprotein OS=Xenotropic MuLV-...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
252Q2F7I9    536   GAG_XMRV4 Gag polyprotein OS=Xenotropic MuLV-...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
253Q2F7J2    536   GAG_XMRV3 Gag polyprotein OS=Xenotropic MuLV-...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
254P27460    536   GAG_MLVCB Gag polyprotein OS=Cas-Br-E murine ...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
255P29167    537   GAG_MLVBM Gag polyprotein OS=Murine leukemia ...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
256P03336    537   GAG_MLVAV Gag polyprotein OS=AKV murine leuke...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
257P21435    540   GAG_MLVHO Gag polyprotein OS=Hortulanus murin...302.8     31.6     43     50GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro.
258Q803L0    202   LN28A_DANRE Protein lin-28 homolog A OS=Danio...382.8     31.2     42     53GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB.
259P29168    536   GAG_MLVDE Gag polyprotein OS=Murine leukemia ...302.8     31.6     43     50GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019068; P:virion assembly; IEA:InterPro.
260P07567    657   GAG_MPMV Gag polyprotein OS=Mason-Pfizer monk...433.1     31.6     33     47GO:0030430; C:host cell cytoplasm; IDA:UniProtKB.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro.
261Q8UN02    626   GAG80_MLVMN Glycosylated Gag polyprotein OS=(...303     31.6     43     50GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019068; P:virion assembly; IEA:InterPro.
262Q69KL9    185   RZ21A_ORYSJ Serine/arginine-rich splicing fac...373.2     31.2     35     54
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
263Q6BSP4    518   BBP_DEBHA Branchpoint-bridging protein OS=008...203.7     31.2     50     75GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
264Q8VIG0    956   ZCH14_MOUSE Zinc finger CCHC domain-containin...243.7     31.2     42     63
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007154; P:cell communication; IEA:InterPro.
265Q8WYQ9    949   ZCH14_HUMAN Zinc finger CCHC domain-containin...287.3     30.4     43     61
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007154; P:cell communication; IEA:InterPro.
266Q6K9C3    200   RZP23_ORYSJ Serine/arginine-rich splicing fac...515.3     30.4     31     53
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
267Q9SJA6    196   RZ22A_ARATH Serine/arginine-rich splicing fac...183.9     30.8     61     83GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008380; P:RNA splicing; NAS:TAIR.
268P0CL88    1127   XRN2_CRYNJ 5'-3' exoribonuclease 2 OS=ATCC MY...194     31.2     53     79GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
269P0CL89    1130   XRN2_CRYNB 5'-3' exoribonuclease 2 OS=(Filoba...194     31.2     53     79GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
270Q9VAQ7    574   SLU7_DROME Pre-mRNA-splicing factor Slu7 OS=D...494     31.2     31     51GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; ISS:FlyBase.
GO:0030628; F:pre-mRNA 3'-splice site binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:UniProtKB.
271Q9UL41    463   PNMA3_HUMAN Paraneoplastic antigen Ma3 OS=Hom...144.6     30.8     64     86GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; NAS:UniProtKB.
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