rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
241 | P27484 | 214 | GRP2_NICSY Glycine-rich protein 2 OS=Nicotian... | 51 | 7.1 | 30 | 35 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 242 | P23090 | 529 | GAG_MLVDU Gag polyprotein OS=Duplan murine le... | 30 | 1.5 | 32.3 | 43 | 53 | GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0019068; P:virion assembly; IEA:InterPro. | 243 | Q5EB47 | 195 | LN28A_XENTR Protein lin-28 homolog A OS=Xenop... | 45 | 1.6 | 32 | 40 | 51 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB. | 244 | Q8JHC4 | 195 | LN28A_XENLA Protein lin-28 homolog A OS=Xenop... | 45 | 1.8 | 32 | 40 | 51 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB. | 245 | Q9CG80 | 710 | TOP1_LACLA DNA topoisomerase 1 OS=lactis). GN... | 98 | 2.2 | 32 | 27 | 38 | GO:0005694; C:chromosome; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006265; P:DNA topological change; IEA:InterPro. | 246 | P11269 | 537 | GAG_MLVRD Gag polyprotein OS=Radiation murine... | 30 | 2.3 | 32 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 247 | P03346 | 433 | GAG_HTLV2 Gag polyprotein OS=Human T-cell leu... | 39 | 2.5 | 31.6 | 38 | 51 | GO:0019013; C:viral nucleocapsid; IEA:InterPro. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 248 | P03332 | 538 | GAG_MLVMS Gag polyprotein OS=Moloney murine l... | 30 | 2.5 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 249 | Q8L7S8 | 748 | RH3_ARATH DEAD-box ATP-dependent RNA helicase... | 19 | 2.8 | 31.6 | 53 | 74 | GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 250 | Q0DM51 | 758 | RH3_ORYSJ DEAD-box ATP-dependent RNA helicase... | 15 | 2.8 | 31.6 | 60 | 80 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 251 | Q27ID9 | 536 | GAG_XMRV6 Gag polyprotein OS=Xenotropic MuLV-... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 252 | Q2F7I9 | 536 | GAG_XMRV4 Gag polyprotein OS=Xenotropic MuLV-... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 253 | Q2F7J2 | 536 | GAG_XMRV3 Gag polyprotein OS=Xenotropic MuLV-... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 254 | P27460 | 536 | GAG_MLVCB Gag polyprotein OS=Cas-Br-E murine ... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 255 | P29167 | 537 | GAG_MLVBM Gag polyprotein OS=Murine leukemia ... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 256 | P03336 | 537 | GAG_MLVAV Gag polyprotein OS=AKV murine leuke... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 257 | P21435 | 540 | GAG_MLVHO Gag polyprotein OS=Hortulanus murin... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0044185; C:host cell late endosome membrane; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0072494; C:host multivesicular body; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0019068; P:virion assembly; IEA:InterPro. | 258 | Q803L0 | 202 | LN28A_DANRE Protein lin-28 homolog A OS=Danio... | 38 | 2.8 | 31.2 | 42 | 53 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0010587; P:miRNA catabolic process; ISS:UniProtKB.::GO:0031054; P:pre-miRNA processing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; ISS:UniProtKB. | 259 | P29168 | 536 | GAG_MLVDE Gag polyprotein OS=Murine leukemia ... | 30 | 2.8 | 31.6 | 43 | 50 | GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0019068; P:virion assembly; IEA:InterPro. | 260 | P07567 | 657 | GAG_MPMV Gag polyprotein OS=Mason-Pfizer monk... | 43 | 3.1 | 31.6 | 33 | 47 | GO:0030430; C:host cell cytoplasm; IDA:UniProtKB.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 261 | Q8UN02 | 626 | GAG80_MLVMN Glycosylated Gag polyprotein OS=(... | 30 | 3 | 31.6 | 43 | 50 | GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:InterPro. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0019068; P:virion assembly; IEA:InterPro. | 262 | Q69KL9 | 185 | RZ21A_ORYSJ Serine/arginine-rich splicing fac... | 37 | 3.2 | 31.2 | 35 | 54 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 263 | Q6BSP4 | 518 | BBP_DEBHA Branchpoint-bridging protein OS=008... | 20 | 3.7 | 31.2 | 50 | 75 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 264 | Q8VIG0 | 956 | ZCH14_MOUSE Zinc finger CCHC domain-containin... | 24 | 3.7 | 31.2 | 42 | 63 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007154; P:cell communication; IEA:InterPro. | 265 | Q8WYQ9 | 949 | ZCH14_HUMAN Zinc finger CCHC domain-containin... | 28 | 7.3 | 30.4 | 43 | 61 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0035091; F:phosphatidylinositol binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007154; P:cell communication; IEA:InterPro. | 266 | Q6K9C3 | 200 | RZP23_ORYSJ Serine/arginine-rich splicing fac... | 51 | 5.3 | 30.4 | 31 | 53 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 267 | Q9SJA6 | 196 | RZ22A_ARATH Serine/arginine-rich splicing fac... | 18 | 3.9 | 30.8 | 61 | 83 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008380; P:RNA splicing; NAS:TAIR. | 268 | P0CL88 | 1127 | XRN2_CRYNJ 5'-3' exoribonuclease 2 OS=ATCC MY... | 19 | 4 | 31.2 | 53 | 79 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW. | 269 | P0CL89 | 1130 | XRN2_CRYNB 5'-3' exoribonuclease 2 OS=(Filoba... | 19 | 4 | 31.2 | 53 | 79 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004534; F:5'-3' exoribonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW. | 270 | Q9VAQ7 | 574 | SLU7_DROME Pre-mRNA-splicing factor Slu7 OS=D... | 49 | 4 | 31.2 | 31 | 51 | GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; ISS:FlyBase. | | | | | | | | | | GO:0030628; F:pre-mRNA 3'-splice site binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:UniProtKB. | 271 | Q9UL41 | 463 | PNMA3_HUMAN Paraneoplastic antigen Ma3 OS=Hom... | 14 | 4.6 | 30.8 | 64 | 86 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; NAS:UniProtKB. |