Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q92176    461   COR1A_BOVIN Coronin-1A OS=Bos taurus (Bovine)...2100.011     41.6     25     44GO:0030864; C:cortical actin cytoskeleton; ISS:RefGenome.::GO:0030027; C:lamellipodium; ISS:RefGenome.::GO:0001891; C:phagocytic cup; ISS:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030595; P:leukocyte chemotaxis; ISS:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:RefGenome.::GO:0001845; P:phagolysosome assembly; ISS:RefGenome.::GO:0050918; P:positive chemotaxis; ISS:RefGenome.::GO:0008360; P:regulation of cell shape; ISS:RefGenome.::GO:0032796; P:uropod organization; ISS:RefGenome.
62Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...1360.011     41.6     23     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
63Q8YRI1    1526   YY46_NOSS1 Uncharacterized WD repeat-containi...1132.3     34.3     25     43
64P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...820.012     41.6     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
65Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...870.012     41.6     24     46GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
66Q5IH81    333   EIF3I_RABIT Eukaryotic translation initiation...791.9     34.3     30     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
67A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...1620.013     41.2     23     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
68Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...870.014     41.2     24     46GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
69Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...870.014     41.2     24     46GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
70A7TH19    347   EIF3I_VANPO Eukaryotic translation initiation...810.015     40.8     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
71P57737    925   CORO7_HUMAN Coronin-7 OS=Homo sapiens (Human)...1290.015     41.2     23     47GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
72Q5ZIU8    657   KTNB1_CHICK Katanin p80 WD40-containing subun...1490.016     41.2     22     44GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
73P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1010.016     40.8     21     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
74Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1010.016     40.8     21     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
75P49695    742   PKWA_THECU Probable serine/threonine-protein ...2120.017     41.2     23     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
76Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...840.44     36.6     29     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
77Q13347    325   EIF3I_HUMAN Eukaryotic translation initiation...791.9     34.3     30     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
78Q6CI08    337   EIF3I_YARLI Eukaryotic translation initiation...1330.019     40.4     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
79A8X8C6    368   TG125_CAEBR WD repeat-containing protein tag-...2190.08     38.5     20     42
80Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...870.023     40.4     24     46GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
81O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...1143.3     33.9     16     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
82P29829    346   GBB2_DROME Guanine nucleotide-binding protein...2050.027     40     25     44GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005834; C:heterotrimeric G-protein complex; IDA:FlyBase.::GO:0016028; C:rhabdomere; IDA:FlyBase.
GO:0003924; F:GTPase activity; IMP:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007202; P:activation of phospholipase C activity; IMP:FlyBase.::GO:0016059; P:deactivation of rhodopsin mediated signaling; IMP:FlyBase.::GO:0016056; P:rhodopsin mediated signaling pathway; IMP:FlyBase.
83Q06078    939   UTP21_YEAST U3 small nucleolar RNA-associated...1620.027     40.4     23     43GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042274; P:ribosomal small subunit biogenesis; IC:SGD.::GO:0006364; P:rRNA processing; IGI:SGD.
84Q5EA99    392   PK1IP_BOVIN p21-activated protein kinase-inte...1120.028     40     24     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
85A9V790    410   LIS1_MONBE Lissencephaly-1 homolog OS=Monosig...1305.8     32.7     24     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
86C4YFX2    511   TUP1_CANAW Transcriptional repressor TUP1 OS=...830.03     40     25     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...2290.03     40.4     24     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
88P0CY34    512   TUP1_CANAL Transcriptional repressor TUP1 OS=...830.03     40     25     51GO:0005625; C:soluble fraction; IDA:CGD.
GO:0016337; P:cell-cell adhesion; IMP:CGD.::GO:0071280; P:cellular response to copper ion; IMP:CGD.::GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0044409; P:entry into host; IMP:CGD.::GO:0051834; P:evasion or tolerance of defenses of other organism involved in symbiotic interaction; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0045827; P:negative regulation of isoprenoid metabolic process; IMP:CGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.::GO:0009372; P:quorum sensing; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
89O14011    488   CWF8_SCHPO Pre-mRNA-splicing factor cwf8 OS=S...1470.031     40     27     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0005681; C:spliceosomal complex; TAS:PomBase.::GO:0000151; C:ubiquitin ligase complex; TAS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
90A0DB19    403   LIS11_PARTE Lissencephaly-1 homolog 1 OS=Para...1216.1     32.7     24     52GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
91Q8BHJ5    514   TBL1R_MOUSE F-box-like/WD repeat-containing p...1232.3     34.3     26     42
GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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