Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
361A5DNK9    451   IPI3_PICGU Pre-rRNA-processing protein IPI3 O...1352.8     33.9     30     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
362Q94AD8    539   FBW3_ARATH F-box/WD-40 repeat-containing prot...1152.9     33.9     26     46
GO:0016036; P:cellular response to phosphate starvation; IMP:TAIR.
363Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...1772.9     33.9     20     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
364O14301    595   YE85_SCHPO Uncharacterized WD repeat-containi...2313     33.9     25     36GO:0030479; C:actin cortical patch; ISS:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0030042; P:actin filament depolymerization; ISS:PomBase.
365Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1233     33.9     24     44GO:0005730; C:nucleolus; IDA:HPA.
366O13282    643   TAF5_SCHPO Transcription initiation factor TF...943.1     33.9     24     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0016573; P:histone acetylation; IC:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IC:PomBase.
367O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1013.1     33.5     24     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
368Q9P775    516   YBEG_SCHPO Uncharacterized WD repeat-containi...833.2     33.9     25     57GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
369Q1JP79    370   ARC1A_BOVIN Actin-related protein 2/3 complex...863.2     33.5     29     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030833; P:regulation of actin filament polymerization; IEA:InterPro.
370Q6BRR2    1265   SEC31_DEBHA Protein transport protein SEC31 O...1893.5     33.9     25     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
371Q6P0D9    330   CIAO1_DANRE Probable cytosolic iron-sulfur pr...2123.5     33.5     17     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
372P62882    353   GBB5_RAT Guanine nucleotide-binding protein s...1993.6     33.5     19     39GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD.
373Q7PP77    327   EIF3I_ANOGA Eukaryotic translation initiation...2853.6     33.5     19     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
374O76071    339   CIAO1_HUMAN Probable cytosolic iron-sulfur pr...2153.7     33.5     18     40GO:0071817; C:MMXD complex; IDA:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; IGI:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.
375Q10281    314   GBLP_SCHPO Guanine nucleotide-binding protein...873.8     33.1     30     47GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005080; F:protein kinase C binding; IPI:PomBase.::GO:0043022; F:ribosome binding; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0035556; P:intracellular signal transduction; IMP:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.::GO:0031139; P:positive regulation of conjugation with cellular fusion; IMP:PomBase.::GO:0032956; P:regulation of actin cytoskeleton organization; IGI:PomBase.::GO:0032995; P:regulation of fungal-type cell wall biogenesis; IGI:PomBase.
376P31146    461   COR1A_HUMAN Coronin-1A OS=Homo sapiens (Human...2043.9     33.5     23     41GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0030864; C:cortical actin cytoskeleton; IDA:UniProtKB.::GO:0030027; C:lamellipodium; IDA:UniProtKB.::GO:0001891; C:phagocytic cup; IDA:UniProtKB.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IDA:UniProtKB.::GO:0043548; F:phosphatidylinositol 3-kinase binding; IDA:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.
GO:0031589; P:cell-substrate adhesion; IMP:UniProtKB.::GO:0045087; P:innate immune response; NAS:UniProtKB.::GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IDA:UniProtKB.::GO:0001845; P:phagolysosome assembly; IMP:UniProtKB.::GO:0050918; P:positive chemotaxis; IDA:UniProtKB.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0032796; P:uropod organization; IBA:RefGenome.
377Q6DRF9    387   WDR55_DANRE WD repeat-containing protein 55 O...773.9     33.5     26     51GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0001654; P:eye development; IMP:UniProtKB.::GO:0060465; P:pharynx development; IMP:UniProtKB.::GO:0006364; P:rRNA processing; ISS:UniProtKB.::GO:0048794; P:swim bladder development; IMP:UniProtKB.::GO:0048538; P:thymus development; IMP:UniProtKB.
378Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...1243.9     33.1     19     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
379Q5R9T6    383   WDR55_PONAB WD repeat-containing protein 55 O...773.9     33.5     23     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0006364; P:rRNA processing; ISS:UniProtKB.
380Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...824     33.5     24     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
381Q4X1Y0    510   PFS2_ASPFU Polyadenylation factor subunit 2 O...1774     33.5     20     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
382Q59VP7    849   ERB1_CANAL Ribosome biogenesis protein ERB1 O...384.1     33.5     42     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
383Q5ZLG9    973   WDR59_CHICK WD repeat-containing protein 59 O...1094.2     33.5     26     49
384Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...554.3     33.1     29     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
385B5X3C4    410   LIS1B_SALSA Lissencephaly-1 homolog B OS=Salm...774.3     33.1     22     40GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
386Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...844.3     33.1     24     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
387Q18964    415   WDFY2_CAEEL WD repeat and FYVE domain-contain...1034.4     33.1     26     45
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0032266; F:phosphatidylinositol-3-phosphate binding; ISS:WormBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006897; P:endocytosis; IMP:WormBase.
388B2B5V0    487   YTM1_PODAN Ribosome biogenesis protein YTM1 O...704.6     33.1     23     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
389Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...1274.6     33.1     23     41GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
390P49846    704   TAF5_DROME Transcription initiation factor TF...794.6     33.5     25     46GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
391O76734    579   TUP1_DICDI General transcriptional corepresso...1814.6     33.1     18     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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