Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q7ZUV2    694   KTNB1_DANRE Katanin p80 WD40-containing subun...1384.7     33.1     23     45GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
32Q9D7H2    328   WDR5B_MOUSE WD repeat-containing protein 5B O...1190.041     39.7     24     45
33Q6GL39    313   WDR82_XENTR WD repeat-containing protein 82 O...1470.038     39.7     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
34P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...1630.002     43.9     27     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
35Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...1480.037     39.7     25     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
36Q9WUM4    474   COR1C_MOUSE Coronin-1C OS=Mus musculus (Mouse...2190.002     43.9     24     43GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0000147; P:actin cortical patch assembly; TAS:MGI.::GO:0006909; P:phagocytosis; TAS:MGI.
37P46800    329   GBLP_DICDI Guanine nucleotide-binding protein...1410.002     43.5     23     41GO:0005813; C:centrosome; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
38Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...824     33.5     28     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
39Q6FT96    711   MDV1_CANGA Mitochondrial division protein 1 O...1320.003     43.5     27     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
40O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...1160.003     43.1     22     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
41Q8BG40    658   KTNB1_MOUSE Katanin p80 WD40-containing subun...1654.5     33.5     22     41GO:0030424; C:axon; IDA:MGI.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0045502; F:dynein binding; IDA:MGI.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
42B4KGX9    322   EIF3I_DROMO Eukaryotic translation initiation...2480.003     42.7     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
43O74340    436   DCA13_SCHPO Protein sof1 OS=Schizosaccharomyc...990.003     43.1     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
44Q6FNJ1    528   IPI3_CANGA Pre-rRNA-processing protein IPI3 O...760.004     43.1     36     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
45Q9BVA0    655   KTNB1_HUMAN Katanin p80 WD40-containing subun...1655.6     33.1     22     41GO:0008352; C:katanin complex; TAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0008017; F:microtubule binding; NAS:UniProtKB.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007026; P:negative regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0031117; P:positive regulation of microtubule depolymerization; IMP:UniProtKB.::GO:0006605; P:protein targeting; NAS:UniProtKB.
46Q6NV31    313   WDR82_DANRE WD repeat-containing protein 82 O...760.021     40.4     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
47Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...840.005     42.7     35     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
48Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...3104.2     33.5     19     40
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
49Q9ULV4    474   COR1C_HUMAN Coronin-1C OS=Homo sapiens (Human...2190.005     42.7     24     43GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0006909; P:phagocytosis; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
50Q5RBW3    925   CORO7_PONAB Coronin-7 OS=Pongo abelii (Sumatr...1310.007     42.7     25     49GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
51P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1140.007     42.4     28     45
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
52Q9USL1    309   YJKA_SCHPO Uncharacterized WD repeat-containi...2170.008     41.6     20     37GO:0000346; C:transcription export complex; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; ISS:PomBase.
53Q640J6    313   WD82A_XENLA WD repeat-containing protein 82-A...1480.08     38.5     25     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
54Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1711.2     35     19     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
55P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...1920.009     42     20     42
56P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...820.01     41.6     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
57P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...1320.011     41.2     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
58P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...1320.011     41.2     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
59B3MVL6    322   EIF3I_DROAN Eukaryotic translation initiation...2440.011     41.2     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
60Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...361.1     35     39     61GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
61Q92176    461   COR1A_BOVIN Coronin-1A OS=Bos taurus (Bovine)...2100.011     41.6     25     44GO:0030864; C:cortical actin cytoskeleton; ISS:RefGenome.::GO:0030027; C:lamellipodium; ISS:RefGenome.::GO:0001891; C:phagocytic cup; ISS:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030595; P:leukocyte chemotaxis; ISS:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:RefGenome.::GO:0001845; P:phagolysosome assembly; ISS:RefGenome.::GO:0050918; P:positive chemotaxis; ISS:RefGenome.::GO:0008360; P:regulation of cell shape; ISS:RefGenome.::GO:0032796; P:uropod organization; ISS:RefGenome.
records
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