Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...781.3     34.7     37     53
302Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...1221.3     35     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
303Q920I9    1489   WDR7_MOUSE WD repeat-containing protein 7 OS=...731.3     35     29     44
304O94620    340   CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...2266.1     32.7     23     44GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
305Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...951.4     35     24     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
306C3XVT5    406   LIS1_BRAFL Lissencephaly-1 homolog OS=Branchi...1141.4     34.7     19     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
307Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...891.4     35     28     43GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
308Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...2001.4     35     22     41
309P38262    535   SIF2_YEAST SIR4-interacting protein SIF2 OS=S...731.4     35     29     49GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0045835; P:negative regulation of meiosis; IPI:SGD.::GO:0032874; P:positive regulation of stress-activated MAPK cascade; IMP:SGD.
310P43033    410   LIS1_BOVIN Platelet-activating factor acetylh...771.4     34.7     22     42GO:0005829; C:cytosol; IDA:BHF-UCL.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0034452; F:dynactin binding; IDA:BHF-UCL.::GO:0045502; F:dynein binding; IDA:BHF-UCL.::GO:0008201; F:heparin binding; IDA:BHF-UCL.::GO:0008017; F:microtubule binding; IDA:MGI.::GO:0043274; F:phospholipase binding; IDA:BHF-UCL.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0046469; P:platelet activating factor metabolic process; IDA:BHF-UCL.::GO:0006810; P:transport; IEA:UniProtKB-KW.
311Q5IS43    410   LIS1_PANTR Platelet-activating factor acetylh...771.4     34.7     22     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
312A8NEG8    434   LIS1_COPC7 Nuclear distribution protein PAC1 ...751.4     34.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
313Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...361.5     34.7     39     58GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
314Q9W328    313   LST8_DROME Protein LST8 homolog OS=Drosophila...2141.5     34.7     20     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
315Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...1451.5     34.7     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
316Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...1451.5     34.7     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
317O60137    357   SWD2_SCHPO Set1 complex component swd2 OS=Sch...581.6     34.7     24     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
318P07834    779   CDC4_YEAST Cell division control protein 4 OS...671.6     34.7     30     45GO:0016363; C:nuclear matrix; IDA:SGD.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IGI:SGD.::GO:0007126; P:meiosis; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
319Q9Y4E6    1490   WDR7_HUMAN WD repeat-containing protein 7 OS=...731.7     35     29     44
320B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1021.7     34.3     19     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
321A3GFK8    1244   SEC31_PICST Protein transport protein SEC31 O...1781.7     34.7     24     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
322Q9V7P1    506   UTP18_DROME U3 small nucleolar RNA-associated...1551.7     34.7     22     42GO:0042585; C:germinal vesicle; IDA:FlyBase.::GO:0005730; C:nucleolus; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; IPI:FlyBase.
GO:0048132; P:female germ-line stem cell division; IMP:FlyBase.::GO:0007405; P:neuroblast proliferation; IMP:FlyBase.::GO:0006364; P:rRNA processing; IMP:FlyBase.
323Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...1771.8     34.7     21     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
324A7S338    409   LIS1_NEMVE Lissencephaly-1 homolog OS=Nematos...771.8     34.3     26     40GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
325Q09589    935   HIRA_CAEEL Protein HIRA homolog OS=Caenorhabd...881.8     34.7     24     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
326Q8SRK1    384   HAT2_ENCCU Histone acetyltransferase type B s...1021.8     34.3     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
327P49026    326   GBLP_TOBAC Guanine nucleotide-binding protein...901.8     34.3     30     50
328Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...601.9     34.7     30     52GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
329B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1022     34.3     19     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
330P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1692     34.3     24     43GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
331O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...2752     34.7     21     36GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
records
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