Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241B7PS00    411   LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes ...820.65     35.8     24     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
242Q6FL15    347   EIF3I_CANGA Eukaryotic translation initiation...1340.66     35.8     22     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
243Q99M63    513   SMU1_RAT WD40 repeat-containing protein SMU1 ...1220.66     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
244Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...2162.5     33.9     20     40GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
245Q5ZME8    513   SMU1_CHICK WD40 repeat-containing protein SMU...1220.71     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
246Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...442     34.3     30     57GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
247O60907    577   TBL1X_HUMAN F-box-like/WD repeat-containing p...1411.7     34.7     24     40GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0019904; F:protein domain specific binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0007605; P:sensory perception of sound; IMP:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
248Q3UKJ7    513   SMU1_MOUSE WD40 repeat-containing protein SMU...1220.72     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
249Q2TAY7    513   SMU1_HUMAN WD40 repeat-containing protein SMU...1220.72     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
250Q76B40    513   SMU1_CRIGR WD40 repeat-containing protein SMU...1220.72     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
251Q2TBS9    513   SMU1_BOVIN WD40 repeat-containing protein SMU...1220.72     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
252Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...1589.6     32.3     23     44GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
253Q652L2    975   HIRA_ORYSJ Protein HIRA OS=Oryza sativa subsp...880.73     35.8     19     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
254Q6NRT3    513   SMU1_XENLA WD40 repeat-containing protein SMU...1220.73     35.8     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
255P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...1040.75     35.8     24     41
256Q54SF9    941   MHCKD_DICDI Myosin heavy chain kinase D OS=Di...900.76     35.8     26     48
GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; ISS:dictyBase.
GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.
257A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...3120.76     35.8     19     37GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
258Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...750.76     35.8     31     44GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
259P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...870.79     35.8     23     43GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
260Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...820.79     35.8     21     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
261A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1630.8     35.8     24     45
262Q6DH44    315   WDR83_DANRE WD repeat domain-containing prote...880.81     35.4     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
263P16371    730   GROU_DROME Protein groucho OS=Drosophila mela...1830.82     35.8     21     39GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
264Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...1170.82     35.4     22     42
GO:0051297; P:centrosome organization; IMP:FlyBase.
265Q5JSH3    913   WDR44_HUMAN WD repeat-containing protein 44 O...750.82     35.8     31     44GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
266Q6NVE8    915   WDR44_MOUSE WD repeat-containing protein 44 O...750.83     35.8     31     44GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
267Q9PTR5    410   LIS1_CHICK Lissencephaly-1 homolog OS=Gallus ...770.86     35.4     22     42
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
268Q9R037    908   WDR44_RAT WD repeat-containing protein 44 OS=...750.87     35.8     31     44GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IDA:RGD.::GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
GO:0017137; F:Rab GTPase binding; IDA:RGD.
GO:0030334; P:regulation of cell migration; IMP:RGD.
269Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...1020.94     35     20     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
270P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...770.94     35.4     26     43GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
271Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...1200.96     35.4     20     44GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
records
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