Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL253W
Length:
422
Number of sequences:
5887
Description:
YNL253W TEX1 SGDID:S000005197, Chr XIV from 170018-171286, Genome Release 64-1-1, Verified ORF, "Protein involved in mRNA export, component of the transcription export (TREX) complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...1231.8     34.7     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
122Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...1610.077     38.9     25     43
123B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...1610.077     38.9     25     43
124B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...1610.078     38.9     25     43
125P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...960.078     38.5     32     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
126C4Q0P6    417   LIS1_SCHMA Lissencephaly-1 homolog OS=Schisto...3300.078     38.9     19     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
127B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...1040.079     38.5     22     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
128B3NSK1    680   WDR48_DROER WD repeat-containing protein 48 h...1610.079     38.9     25     43
129B4P7H8    680   WDR48_DROYA WD repeat-containing protein 48 h...1610.08     38.9     25     43
130Q8H0T9    837   KTNB1_ARATH Katanin p80 WD40 repeat-containin...870.08     38.9     24     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:TAIR.
131Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...1130.56     36.2     27     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
132Q4R2Z6    622   WDR48_MACFA WD repeat-containing protein 48 O...2290.083     38.9     24     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
133Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...910.087     38.5     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
134Q5AB15    505   IPI3_CANAL Pre-rRNA-processing protein IPI3 O...730.088     38.9     38     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
135Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...1580.088     38.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
136Q5R7R2    325   EIF3I_PONAB Eukaryotic translation initiation...791.8     34.3     30     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
137Q15542    800   TAF5_HUMAN Transcription initiation factor TF...1400.42     36.6     21     40GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0005669; C:transcription factor TFIID complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0046983; F:protein dimerization activity; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0016573; P:histone acetylation; IDA:GOC.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0016032; P:viral reproduction; TAS:Reactome.
138Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...1770.096     38.5     22     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
139Q55FJ2    766   WDR91_DICDI WD repeat-containing protein 91 h...1750.096     38.9     23     39
140Q9Y485    3027   DMXL1_HUMAN DmX-like protein 1 OS=Homo sapien...850.097     38.9     21     47
141Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...2290.098     38.5     24     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
142Q5RAW8    677   WDR48_PONAB WD repeat-containing protein 48 O...2290.099     38.5     24     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
143Q8C092    801   TAF5_MOUSE Transcription initiation factor TF...1400.12     38.5     21     40GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
144Q32PG3    677   WDR48_BOVIN WD repeat-containing protein 48 O...2290.099     38.5     24     40GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
145Q9BQ87    522   TBL1Y_HUMAN F-box-like/WD repeat-containing p...1790.11     38.5     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
146Q8IWB7    410   WDFY1_HUMAN WD repeat and FYVE domain-contain...1040.11     38.1     23     47GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005769; C:early endosome; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005545; F:1-phosphatidylinositol binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
147Q5UQT6    526   YL344_MIMIV Uncharacterized WD repeat-contain...620.12     38.5     32     53
148P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...1510.12     38.1     26     48GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
149Q17963    376   TG125_CAEEL WD repeat-containing protein tag-...2150.15     37.7     20     43GO:0005634; C:nucleus; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0051568; P:histone H3-K4 methylation; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
150P40217    347   EIF3I_YEAST Eukaryotic translation initiation...1380.12     38.1     23     42GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
GO:0002188; P:translation reinitiation; IMP:SGD.
151A6ZMK5    347   EIF3I_YEAS7 Eukaryotic translation initiation...1380.12     38.1     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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