Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL250W
Length:
1312
Number of sequences:
5887
Description:
YNL250W RAD50 SGDID:S000005194, Chr XIV from 175410-179348, Genome Release 64-1-1, Verified ORF, "Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61O67124    978   RAD50_AQUAE Probable DNA double-strand break ...950.23     39.7     33     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
62P28023    1280   DCTN1_RAT Dynactin subunit 1 OS=Rattus norveg...3760.28     39.3     25     44GO:0005868; C:cytoplasmic dynein complex; IDA:RGD.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0008017; F:microtubule binding; NAS:RGD.::GO:0003777; F:microtubule motor activity; TAS:RGD.
GO:0007017; P:microtubule-based process; TAS:RGD.::GO:0006810; P:transport; IEA:UniProtKB-KW.
63P46391    385   RECF_MYCLE DNA replication and repair protein...420.28     38.9     45     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
64B8ZTP0    385   RECF_MYCLB DNA replication and repair protein...420.28     38.9     45     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
65Q8TRL1    1074   RAD50_METAC DNA double-strand break repair Ra...6150.29     39.3     22     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
66Q9CBT5    1203   SMC_MYCLE Chromosome partition protein Smc OS...430.29     39.3     37     65GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
67Q9KHU6    349   RECF_ACHLA DNA replication and repair protein...410.3     38.9     37     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
68A0PKB4    385   RECF_MYCUA DNA replication and repair protein...420.32     38.9     48     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
69B2HI48    385   RECF_MYCMM DNA replication and repair protein...420.32     38.9     48     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
70Q8REH4    1183   SMC_FUSNN Chromosome partition protein Smc OS...440.33     39.3     39     64GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
71B9E1H0    1185   SMC_CLOK1 Chromosome partition protein Smc OS...5520.35     38.9     21     43GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
72A7YWM2    431   K1C40_BOVIN Keratin, type I cytoskeletal 40 O...2950.36     38.5     26     41GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
GO:0005198; F:structural molecule activity; IEA:InterPro.
73Q9HRW3    883   RAD50_HALSA DNA double-strand break repair Ra...5350.43     38.5     20     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
74P29551    1042   EF3_PNECA Elongation factor 3 OS=Pneumocystis...1030.58     38.1     29     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.
75P47540    982   SMC_MYCGE Chromosome partition protein Smc OS...500.48     38.5     36     58GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
76P94411    226   YCLH_BACSU Uncharacterized ABC transporter AT...590.49     37.4     29     61
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
77Q9RT44    909   SBCC_DEIRA Nuclease sbcCD subunit C OS=LMG 40...740.54     38.5     31     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
78Q8U4L3    260   Y068_PYRFU Putative ABC transporter ATP-bindi...580.55     37.7     40     59GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
79Q46L27    267   PSTB_PROMT Phosphate import ATP-binding prote...1810.55     37.7     22     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005315; F:inorganic phosphate transmembrane transporter activity; IEA:InterPro.::GO:0015415; F:phosphate ion transmembrane-transporting ATPase activity; IEA:EC.
80O14134    1057   ELF1_SCHPO mRNA export factor elf1 OS=Schizos...510.56     38.5     37     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005524; F:ATP binding; IDA:PomBase.::GO:0016887; F:ATPase activity; IDA:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:PomBase.::GO:0042274; P:ribosomal small subunit biogenesis; ISS:PomBase.
81Q8K0Y2    404   KT33A_MOUSE Keratin, type I cuticular Ha3-I O...2980.6     37.7     23     45GO:0005882; C:intermediate filament; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:MGI.::GO:0005198; F:structural molecule activity; IEA:InterPro.
82Q0BN75    231   LOLD_FRATO Lipoprotein-releasing system ATP-b...650.63     37.4     31     48GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
83Q59037    1169   SMC_METJA Chromosome partition protein Smc OS...810.63     38.1     28     52GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
84P0A9U3    530   YBIT_ECOLI Uncharacterized ABC transporter AT...620.66     37.7     32     58
GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0009409; P:response to cold; IEP:EcoCyc.
85P0A9U4    530   YBIT_ECOL6 Uncharacterized ABC transporter AT...620.66     37.7     32     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
86P0A9U5    530   YBIT_ECO57 Uncharacterized ABC transporter AT...620.66     37.7     32     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
87Q9PJX9    236   Y697_CHLMU Probable metal transport system AT...800.77     37     30     48GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
88Q5NHP2    231   LOLD_FRATT Lipoprotein-releasing system ATP-b...670.8     37     33     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
89Q2A4V5    231   LOLD_FRATH Lipoprotein-releasing system ATP-b...670.8     37     33     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
90Q14J44    231   LOLD_FRAT1 Lipoprotein-releasing system ATP-b...670.8     37     33     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
91Q9NNX6    404   CD209_HUMAN CD209 antigen OS=Homo sapiens (Hu...2400.81     37.4     25     45GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005537; F:mannose binding; TAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0042605; F:peptide antigen binding; NAS:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0046790; F:virion binding; TAS:UniProtKB.
GO:0009988; P:cell-cell recognition; TAS:UniProtKB.::GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0007157; P:heterophilic cell-cell adhesion; TAS:UniProtKB.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0035556; P:intracellular signal transduction; NAS:UniProtKB.::GO:0046795; P:intracellular virion transport; TAS:UniProtKB.::GO:0007159; P:leukocyte cell-cell adhesion; NAS:UniProtKB.::GO:0046968; P:peptide antigen transport; NAS:UniProtKB.::GO:0042129; P:regulation of T cell proliferation; IDA:MGI.::GO:0019062; P:viral attachment to host cell; TAS:UniProtKB.::GO:0019079; P:viral genome replication; NAS:UniProtKB.
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