Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL250W
Length:
1312
Number of sequences:
5887
Description:
YNL250W RAD50 SGDID:S000005194, Chr XIV from 175410-179348, Genome Release 64-1-1, Verified ORF, "Subunit of MRX complex, with Mre11p and Xrs2p, involved in processing double-strand DNA breaks in vegetative cells, initiation of meiotic DSBs, telomere maintenance, and nonhomologous end joining"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q8K268    709   ABCF3_MOUSE ATP-binding cassette sub-family F...950.004     45.1     32     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
32Q8IY18    1101   SMC5_HUMAN Structural maintenance of chromoso...1310.007     44.7     25     47GO:0000781; C:chromosome, telomeric region; IDA:UniProtKB.::GO:0016605; C:PML body; IDA:UniProtKB.::GO:0030915; C:Smc5-Smc6 complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0090398; P:cellular senescence; IMP:UniProtKB.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0034184; P:positive regulation of maintenance of mitotic sister chromatid cohesion; IMP:UniProtKB.::GO:0045842; P:positive regulation of mitotic metaphase/anaphase transition; IMP:UniProtKB.::GO:0000722; P:telomere maintenance via recombination; IMP:UniProtKB.
33Q8TZY2    1177   SMC_PYRFU Chromosome partition protein Smc OS...2100.62     38.1     25     47GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
34E1X022    1226   SMC_BACMS Chromosome partition protein Smc OS...450.008     44.3     47     62GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
35Q66H39    709   ABCF3_RAT ATP-binding cassette sub-family F m...1380.008     44.3     28     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
36Q58718    1005   RAD50_METJA DNA double-strand break repair Ra...8820.047     42     23     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
37Q9X1X1    852   RAD50_THEMA Probable DNA double-strand break ...1270.035     42.4     28     46GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004828; F:serine-tRNA ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006434; P:seryl-tRNA aminoacylation; IEA:InterPro.
38O94489    1047   EF3_SCHPO Elongation factor 3 OS=Schizosaccha...1010.47     38.5     28     42GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0003746; F:translation elongation factor activity; ISS:PomBase.
GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.
39Q88WJ9    1185   SMC_LACPL Chromosome partition protein Smc OS...430.018     43.1     47     65GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
40Q9UZC8    880   RAD50_PYRAB DNA double-strand break repair Ra...4720.02     43.1     22     42
GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0016887; F:ATPase activity; IEA:HAMAP.::GO:0004519; F:endonuclease activity; IEA:HAMAP.::GO:0004527; F:exonuclease activity; IEA:HAMAP.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:HAMAP.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; IEA:HAMAP.
41P62135    786   RAD50_NANEQ DNA double-strand break repair Ra...371.6     37     41     65
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
42P75370    244   P29_MYCPN Probable ABC transporter ATP-bindin...720.04     41.2     40     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
43P41508    979   SMC_MYCHR Chromosome partition protein Smc OS...880.043     42     32     50GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
44Q73L25    226   LOLD_TREDE Lipoprotein-releasing system ATP-b...800.046     40.8     30     59GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
45Q57399    253   Y1470_HAEIN Uncharacterized ABC transporter A...1340.048     40.8     28     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
46Q97X60    530   Y1893_SULSO Putative ABC transporter ATP-bind...740.063     41.2     30     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
47Q7UQV4    1192   SMC_RHOBA Chromosome partition protein Smc OS...430.072     41.2     40     65GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
48P51834    1186   SMC_BACSU Chromosome partition protein Smc OS...780.08     41.2     32     55GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
49Q15149    4684   PLEC_HUMAN Plectin OS=Homo sapiens (Human). G...3159.2     34.7     20     43GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0030056; C:hemidesmosome; IDA:UniProtKB.::GO:0045111; C:intermediate filament cytoskeleton; IDA:HPA.::GO:0042383; C:sarcolemma; IDA:UniProtKB.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0008307; F:structural constituent of muscle; TAS:ProtInc.
GO:0006921; P:cellular component disassembly involved in apoptotic process; TAS:Reactome.::GO:0031581; P:hemidesmosome assembly; IDA:UniProtKB.
50Q2SJK0    231   LOLD_HAHCH Lipoprotein-releasing system ATP-b...800.097     39.7     29     54GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
51Q8KBS6    1183   SMC_CHLTE Chromosome partition protein Smc OS...1000.11     40.8     29     49GO:0005694; C:chromosome; IEA:InterPro.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0030261; P:chromosome condensation; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0007062; P:sister chromatid cohesion; IEA:InterPro.
52P63389    637   YHES_ECOLI Uncharacterized ABC transporter AT...2250.13     40     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006810; P:transport; IEA:UniProtKB-KW.
53P63390    637   YHES_ECO57 Uncharacterized ABC transporter AT...2250.13     40     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
54Q9SMH5    4334   DYHC2_CHLRE Cytoplasmic dynein 2 heavy chain ...2610.15     40.4     22     45GO:0005858; C:axonemal dynein complex; IDA:BHF-UCL.::GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IDA:BHF-UCL.::GO:0020017; C:flagellar membrane; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0072594; P:establishment of protein localization to organelle; IMP:BHF-UCL.::GO:0009296; P:flagellum assembly; IMP:BHF-UCL.::GO:0007018; P:microtubule-based movement; IEA:InterPro.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
55A9NE68    349   RECF_ACHLI DNA replication and repair protein...410.15     39.7     39     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
56Q8SRV5    554   ABCF3_ENCCU Probable ATP-binding cassette sub...760.16     40     32     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
57P45022    257   Y1078_HAEIN Probable amino-acid ABC transport...950.17     39.3     24     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006865; P:amino acid transport; IEA:UniProtKB-KW.
58P53978    1044   EF3B_YEAST Elongation factor 3B OS=Saccharomy...1080.18     40     31     47GO:0022626; C:cytosolic ribosome; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003746; F:translation elongation factor activity; IGI:SGD.
59Q97WT4    530   Y2030_SULSO Putative ABC transporter ATP-bind...610.2     39.7     30     52GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
60Q57675    695   VATI_METJA V-type ATP synthase subunit I OS=J...1840.23     39.7     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0033177; C:proton-transporting two-sector ATPase complex, proton-transporting domain; IEA:InterPro.
GO:0015078; F:hydrogen ion transmembrane transporter activity; IEA:InterPro.
GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
61O67124    978   RAD50_AQUAE Probable DNA double-strand break ...950.23     39.7     33     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 184 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::