Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL245C
Length:
179
Number of sequences:
5887
Description:
YNL245C CWC25 SGDID:S000005189, Chr XIV from 186885-186346, Genome Release 64-1-1, reverse complement, Verified ORF, "Splicing factor required for the first step of pre-mRNA splicing; binding to the spliceosome requires Prp2p and Yju2p; heat-stable protein; has similarity to S. pombe Cwf25p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53854    179   CWC25_YEAST Pre-mRNA-splicing factor CWC25 OS...1792e-123     352     100     100GO:0005684; C:U2-type spliceosomal complex; IDA:SGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:SGD.
2Q6CUQ5    206   CWC25_KLULA Pre-mRNA-splicing factor CWC25 OS...1561e-26     105     46     58GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3Q6FP02    176   CWC25_CANGA Pre-mRNA-splicing factor CWC25 OS...1513e-22     93.2     42     58GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q9Y805    376   CWC25_SCHPO Pre-mRNA-splicing factor cwf25 OS...1080.0000000000008     68.9     41     60GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
5Q4IRI9    393   CWC25_GIBZE Pre-mRNA-splicing factor CWC25 OS...1100.000000000002     67.8     37     60GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q6C1V6    561   CWC25_YARLI Pre-mRNA-splicing factor CWC25 OS...1150.000000000003     67.8     37     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7Q5B0I1    415   CWC25_EMENI Pre-mRNA-splicing factor cwc25 OS...1110.000000000007     66.6     34     61GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q59LQ5    221   CWC25_CANAL Pre-mRNA-splicing factor CWC25 OS...830.00000000001     63.9     45     61GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9Q6BNE1    244   CWC25_DEBHA Pre-mRNA-splicing factor CWC25 OS...1540.0000000005     59.7     32     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10Q7SI59    444   CWC25_NEUCR Pre-mRNA-splicing factor cwc-25 O...1660.00000002     56.2     27     48GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11Q4X1D7    447   CWC25_ASPFU Pre-mRNA-splicing factor cwc25 OS...1310.0000001     54.3     34     56GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12Q75AR4    138   CWC25_ASHGO Pre-mRNA-splicing factor CWC25 OS...270.0000008     49.3     74     93GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13P0CM98    434   CWC25_CRYNJ Pre-mRNA-splicing factor CWC25 OS...1200.000003     49.7     33     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
14P0CM99    434   CWC25_CRYNB Pre-mRNA-splicing factor CWC25 OS...1200.000003     49.7     33     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q9NXE8    425   CWC25_HUMAN Pre-mRNA-splicing factor CWC25 ho...990.000007     48.5     32     57
16Q9DBF7    416   CWC25_MOUSE Pre-mRNA-splicing factor CWC25 ho...990.000007     48.5     32     57
17Q4P6I3    428   CWC25_USTMA Pre-mRNA-splicing factor CWC25 OS...1070.00004     46.2     37     59GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18P17452    1285   TOXA_PASMD Dermonecrotic toxin OS=Pasteurella...1550.67     33.9     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033644; C:host cell membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
19P03018    720   UVRD_ECOLI DNA helicase II OS=Escherichia col...622.7     32     26     52GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006268; P:DNA unwinding involved in replication; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
20Q05311    720   UVRD_SALTY DNA helicase II OS=Salmonella typh...622.9     32     26     52GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006268; P:DNA unwinding involved in replication; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
21P94464    447   RSMB_BACSU Ribosomal RNA small subunit methyl...1249.1     30.4     27     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008649; F:rRNA methyltransferase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
22B4U5Q9    284   ISPE_HYDS0 4-diphosphocytidyl-2-C-methyl-D-er...439.2     30.4     42     51
GO:0050515; F:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.
records
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