UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL236W

Length:

974

Number of sequences:

5887

Description:

YNL236W SIN4 SGDID:S000005180, Chr XIV from 206930-209854, Genome Release 64-1-1, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; contributes to both postive and negative transcriptional regulation; dispensible for basal transcription"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P32259	974	MED16_YEAST Mediator of RNA polymerase II tra...	974	0	2018	100	100	GO:0070847; C:core mediator complex; IDA:SGD.
									GO:0001102; F:RNA polymerase II activating transcription factor binding; IDA:SGD.
									GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.
2	Q6FP10	973	MED16_CANGA Mediator of RNA polymerase II tra...	974	0	1224	60	76	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3	Q75E72	938	MED16_ASHGO Mediator of RNA polymerase II tra...	978	0	823	42	63	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4	Q6CQ49	956	MED16_KLULA Mediator of RNA polymerase II tra...	982	0	624	36	57	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5	A3LY88	1020	MED16_PICST Mediator of RNA polymerase II tra...	1079	2e-42	171	23	41	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6	Q59PP6	1052	MED16_CANAL Mediator of RNA polymerase II tra...	1125	3e-18	94.4	20	38	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7	Q6C1B1	924	MED16_YARLI Mediator of RNA polymerase II tra...	892	0.000000000000004	84	21	38	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8	Q5BE03	930	MED16_EMENI Mediator of RNA polymerase II tra...	821	0.0000000000002	78.6	21	38	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9	A1CQ63	957	MED16_ASPCL Mediator of RNA polymerase II tra...	707	0.0000001	59.7	19	38	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10	A1D327	955	MED16_NEOFI Mediator of RNA polymerase II tra...	705	0.00001	53.5	18	36	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11	A4D9J5	955	MED16_ASPFU Mediator of RNA polymerase II tra...	473	0.00003	51.6	19	38	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12	Q2NJ16	1353	RPOC_AYWBP DNA-directed RNA polymerase subuni...	136	0.48	38.1	26	48
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
13	Q6YQW2	1353	RPOC_ONYPE DNA-directed RNA polymerase subuni...	136	0.6	37.7	26	48
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
14	Q2VYV7	546	G6PI_MAGSA Glucose-6-phosphate isomerase OS=M...	60	3.3	35	32	50	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0004347; F:glucose-6-phosphate isomerase activity; IEA:EC.
									GO:0006094; P:gluconeogenesis; IEA:UniProtKB-KW.::GO:0006096; P:glycolysis; IEA:UniProtKB-KW.
15	P52138	567	YFJW_ECOLI Uncharacterized protein yfjW OS=Es...	49	3.6	35	39	51	GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
16	B3NXQ7	416	WUHO_DROER tRNA (guanine-N(7)-)-methyltransfe...	89	5.2	34.3	26	40	GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
									GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
17	Q0B080	425	ENO_SYNWW Enolase OS=Syntrophomonas wolfei su...	75	5.4	34.3	25	52	GO:0009986; C:cell surface; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0000015; C:phosphopyruvate hydratase complex; IEA:InterPro.
									GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0004634; F:phosphopyruvate hydratase activity; IEA:EC.
									GO:0006096; P:glycolysis; IEA:UniProtKB-KW.
18	Q85WV5	2062	YCF2_PINKO Protein ycf2 OS=Pinus koraiensis (...	210	6.1	34.7	24	42	GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.

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