UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL230C

Length:

379

Number of sequences:

5887

Description:

YNL230C ELA1 SGDID:S000005174, Chr XIV from 218662-217523, Genome Release 64-1-1, reverse complement, Verified ORF, "Elongin A; F-box protein that forms a heterodimer with Elc1p and is required for ubiquitin-dependent degradation of the RNA Polymerase II subunit Rpo21p; subunit of the Elongin-Cullin-Socs (ECS) ligase complex"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P53861	379	ELOA1_YEAST Elongin-A OS=Saccharomyces cerevi...	379	0	785	100	100	GO:0031463; C:Cul3-RING ubiquitin ligase complex; IMP:SGD.::GO:0070449; C:elongin complex; IPI:SGD.::GO:0016021; C:integral to membrane; IEA:InterPro.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
2	Q75E67	332	ELOA1_ASHGO Elongin-A OS=Y-1056) (Yeast) (Ere...	303	3e-46	166	32	54	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
3	Q8CB77	773	ELOA1_MOUSE Transcription elongation factor B...	85	0.00003	49.7	31	53	GO:0016021; C:integral to membrane; IEA:InterPro.
									GO:0003677; F:DNA binding; IEA:InterPro.
4	Q63187	773	ELOA1_RAT Transcription elongation factor B p...	85	0.00003	49.7	31	53	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
									GO:0003690; F:double-stranded DNA binding; TAS:RGD.
									GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.
5	Q14241	798	ELOA1_HUMAN Transcription elongation factor B...	82	0.00004	49.3	32	54	GO:0016021; C:integral to membrane; IEA:InterPro.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
6	Q09413	434	ELOA1_CAEEL Transcription elongation factor B...	132	0.0003	46.2	28	49	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
									GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.
7	Q9VCP0	643	ELOA1_DROME Transcription elongation factor B...	83	0.003	43.1	27	52	GO:0070449; C:elongin complex; ISS:FlyBase.::GO:0016021; C:integral to membrane; IEA:InterPro.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:FlyBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
8	Q8NG57	546	ELOA3_HUMAN RNA polymerase II transcription f...	84	0.004	43.1	30	51	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9	O59671	263	POF4_SCHPO Elongin-A OS=Schizosaccharomyces p...	68	0.017	40.4	31	54	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0008023; C:transcription elongation factor complex; ISS:PomBase.
									GO:0005515; F:protein binding; IPI:UniProtKB.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
10	Q3SY89	546	EA3L1_HUMAN RNA polymerase II transcription f...	84	0.025	40.4	29	50	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11	A6NLF2	546	EA3L2_HUMAN RNA polymerase II transcription f...	84	0.044	39.7	29	49	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12	Q8IYF1	753	ELOA2_HUMAN RNA polymerase II transcription f...	66	0.057	39.3	32	50	GO:0016021; C:integral to membrane; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.
									GO:0032784; P:regulation of transcription elongation, DNA-dependent; TAS:ProtInc.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
13	P0CQ67	1198	RAD5_CRYNB DNA repair protein RAD5 OS=(Filoba...	105	2.7	33.9	30	38	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
14	Q9AET5	506	GTFA_STRGN Probable glucosyl transferase GtfA...	158	4.8	33.1	25	42
									GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
									GO:0009058; P:biosynthetic process; IEA:InterPro.

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