Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL227C
Length:
590
Number of sequences:
5887
Description:
YNL227C JJJ1 SGDID:S000005171, Chr XIV from 222431-220659, Genome Release 64-1-1, reverse complement, Verified ORF, "Co-chaperone that stimulates the ATPase activity of Ssa1p, required for a late step of ribosome biogenesis; associated with the cytosolic large ribosomal subunit; contains a J-domain; mutation causes defects in fluid-phase endocytosis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991A5IL01    360   UXUA_THEP1 Mannonate dehydratase OS=Thermotog...833.4     34.3     30     49
GO:0008927; F:mannonate dehydratase activity; IEA:EC.
GO:0006064; P:glucuronate catabolic process; IEA:InterPro.
992P32527    433   ZUO1_YEAST Zuotin OS=Saccharomyces cerevisiae...873.6     34.3     25     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; IMP:SGD.::GO:0005844; C:polysome; IDA:SGD.::GO:0005840; C:ribosome; IDA:SGD.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0031072; F:heat shock protein binding; IEA:InterPro.::GO:0051082; F:unfolded protein binding; NAS:SGD.
GO:0006457; P:protein folding; NAS:SGD.::GO:0006450; P:regulation of translational fidelity; IMP:SGD.::GO:0000054; P:ribosomal subunit export from nucleus; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
993Q9SAG8    163   DNAJ8_ARATH Chaperone protein dnaJ 8, chlorop...523.7     33.1     33     56GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0031072; F:heat shock protein binding; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006950; P:response to stress; IMP:TAIR.
994Q9LME6    524   MBD8_ARATH Methyl-CpG-binding domain-containi...814.2     33.9     30     49GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
995P15822    2718   ZEP1_HUMAN Zinc finger protein 40 OS=Homo sap...744.3     34.3     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; TAS:ProtInc.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
996Q00900    2437   ZEP2_RAT Human immunodeficiency virus type I ...594.4     34.3     34     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
997Q03172    2688   ZEP1_MOUSE Zinc finger protein 40 OS=Mus musc...744.4     34.3     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
998B4K5R2    1431   SPNE_DROMO Probable ATP-dependent RNA helicas...664.7     33.9     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
999Q9NDJ2    3198   DOM_DROME Helicase domino OS=Drosophila melan...1755.6     33.9     23     45GO:0016585; C:chromatin remodeling complex; ISS:FlyBase.::GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; ISS:FlyBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:FlyBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0070983; P:dendrite guidance; IMP:FlyBase.::GO:0016458; P:gene silencing; IGI:FlyBase.::GO:0030097; P:hemopoiesis; TAS:FlyBase.::GO:0016573; P:histone acetylation; IDA:UniProtKB.::GO:0043486; P:histone exchange; IDA:UniProtKB.::GO:0002165; P:instar larval or pupal development; IMP:FlyBase.::GO:0035207; P:negative regulation of hemocyte proliferation; TAS:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IGI:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0035222; P:wing disc pattern formation; IGI:FlyBase.
1000Q12368    194   SNU23_YEAST 23 kDa U4/U6.U5 small nuclear rib...395.7     32.7     38     54GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
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