Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL224C
Length:
767
Number of sequences:
5887
Description:
YNL224C SQS1 SGDID:S000005168, Chr XIV from 227099-224796, Genome Release 64-1-1, reverse complement, Verified ORF, "Stimulates the ATPase and helicase activities of Prp43p; acts with Prp43p to stimulate 18s rRNA maturation by Nob1p; overexpression antagonizes the suppression of splicing defects by spp382 mutants; component of pre-ribosomal particles"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q94C11    443   SUGP1_ARATH SURP and G-patch domain-containin...500.004     43.9     42     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
32P52756    815   RBM5_HUMAN RNA-binding protein 5 OS=Homo sapi...450.004     44.3     42     69GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; TAS:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; TAS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB.
33Q91YE7    815   RBM5_MOUSE RNA-binding protein 5 OS=Mus muscu...450.005     44.3     42     69GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
34B2GV05    815   RBM5_RAT RNA-binding protein 5 OS=Rattus norv...450.005     44.3     42     69GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
35A4L691    331   PINX1_RAT PIN2/TERF1-interacting telomerase i...400.005     43.5     50     68GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
36Q17784    830   TFP11_CAEEL Septin and tuftelin-interacting p...440.005     43.9     45     70GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
37Q8CH02    643   SUGP1_MOUSE SURP and G-patch domain-containin...310.006     43.9     61     77GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
38Q68FU8    644   SUGP1_RAT SURP and G-patch domain-containing ...310.006     43.5     61     77GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
39Q9UTK6    797   YKR3_SCHPO G-patch domain-containing protein ...530.009     43.1     40     64GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0000390; P:spliceosomal complex disassembly; ISS:PomBase.
40Q8IWZ8    645   SUGP1_HUMAN SURP and G-patch domain-containin...310.011     42.7     61     77GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.
41Q96BK5    328   PINX1_HUMAN PIN2/TERF1-interacting telomerase...400.013     42     48     68GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:HPA.::GO:0000228; C:nuclear chromosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005819; C:spindle; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0010521; F:telomerase inhibitor activity; TAS:UniProtKB.::GO:0070034; F:telomeric RNA binding; IDA:UniProtKB.
GO:0007080; P:mitotic metaphase plate congression; IMP:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; NAS:UniProtKB.
42Q6DGZ0    262   CCD75_DANRE Coiled-coil domain-containing pro...450.014     41.6     44     71
GO:0003676; F:nucleic acid binding; IEA:InterPro.
43Q9NAA5    927   MTR1_CAEEL Cap-specific mRNA (nucleoside-2'-O...430.014     42.7     44     67
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.::GO:0000003; P:reproduction; IMP:WormBase.
44Q8CH09    1067   SUGP2_MOUSE SURP and G-patch domain-containin...350.015     42.7     51     77GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
45Q8IX01    1082   SUGP2_HUMAN SURP and G-patch domain-containin...460.017     42.4     43     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
46A8XYX2    874   MTR1A_CAEBR Cap-specific mRNA (nucleoside-2'-...500.036     41.2     36     62
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.
47P18583    2426   SON_HUMAN Protein SON OS=Homo sapiens (Human)...480.054     40.8     42     58GO:0016607; C:nuclear speck; IDA:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
GO:0006916; P:anti-apoptosis; IDA:UniProtKB.::GO:0000910; P:cytokinesis; IMP:UniProtKB.::GO:0006397; P:mRNA processing; IDA:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.::GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0000073; P:spindle pole body separation; IMP:UniProtKB.
48Q9QX47    2444   SON_MOUSE Protein SON OS=Mus musculus (Mouse)...500.054     40.8     44     58GO:0016607; C:nuclear speck; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0050733; F:RS domain binding; IPI:MGI.
GO:0000910; P:cytokinesis; ISS:UniProtKB.::GO:0006397; P:mRNA processing; ISS:UniProtKB.::GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0000073; P:spindle pole body separation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
49Q09655    371   GPAN1_CAEEL G patch domain and ankyrin repeat...500.13     38.9     40     60
GO:0003676; F:nucleic acid binding; IEA:InterPro.
50A2A6A1    1505   GPTC8_MOUSE G patch domain-containing protein...450.18     39.3     42     69GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
51Q9UKJ3    1502   GPTC8_HUMAN G patch domain-containing protein...450.26     38.5     42     69GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
52A8XYX3    846   MTR1B_CAEBR Inactive cap-specific mRNA (nucle...390.28     38.5     41     72
GO:0004483; F:mRNA (nucleoside-2'-O-)-methyltransferase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006370; P:mRNA capping; ISS:UniProtKB.
53Q6P859    323   GPTC4_XENTR G patch domain-containing protein...500.36     37.4     44     60
GO:0003676; F:nucleic acid binding; IEA:InterPro.
54Q4V842    324   GPTC4_XENLA G patch domain-containing protein...371.8     35.4     46     65
GO:0003676; F:nucleic acid binding; IEA:InterPro.
55Q6DI35    832   TFP11_DANRE Tuftelin-interacting protein 11 O...401.8     35.8     40     73GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
56Q9Y103    839   TFP11_DROME Septin-interacting protein 1 OS=D...672     35.8     31     57GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
57Q8CGZ0    936   CHERP_MOUSE Calcium homeostasis endoplasmic r...342     35.8     47     65GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
58Q8IWX8    916   CHERP_HUMAN Calcium homeostasis endoplasmic r...342.3     35.4     47     65GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0033017; C:sarcoplasmic reticulum membrane; ISS:UniProtKB.
GO:0044325; F:ion channel binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0008285; P:negative regulation of cell proliferation; IDA:MGI.::GO:0007399; P:nervous system development; TAS:ProtInc.::GO:0051533; P:positive regulation of NFAT protein import into nucleus; IMP:UniProtKB.::GO:0051209; P:release of sequestered calcium ion into cytosol; IMP:UniProtKB.::GO:0006396; P:RNA processing; IEA:InterPro.
59Q06152    274   YL271_YEAST Uncharacterized protein YLR271W O...403.7     34.3     40     58GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
60Q30NW8    446   GLMM_SULDN Phosphoglucosamine mutase OS=(Thio...574.5     34.3     35     49
GO:0000287; F:magnesium ion binding; IEA:InterPro.::GO:0008966; F:phosphoglucosamine mutase activity; IEA:EC.
GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
61Q6ZQF7    829   JADE2_MOUSE Protein Jade-2 OS=Mus musculus (M...1434.8     34.3     29     38
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; ISS:UniProtKB.::GO:0043983; P:histone H4-K12 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.
records
Previous ‹‹ ›› Next Total records: 75 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::