Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL222W
Length:
206
Number of sequences:
5887
Description:
YNL222W SSU72 SGDID:S000005166, Chr XIV from 229094-229714, Genome Release 64-1-1, Verified ORF, "Transcription/RNA-processing factor that associates with TFIIB and cleavage/polyadenylation factor Pta1p; exhibits phosphatase activity on serine-5 of the RNA polymerase II C-terminal domain; affects start site selection in vivo"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53538    206   SSU72_YEAST RNA polymerase II subunit A C-ter...2061e-153     431     100     100GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0004721; F:phosphoprotein phosphatase activity; IGI:SGD.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IMP:SGD.::GO:0009302; P:snoRNA transcription; IMP:SGD.::GO:0030847; P:termination of RNA polymerase II transcription, exosome-dependent; IMP:SGD.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; IMP:SGD.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IPI:SGD.
2Q6FMU7    204   SSU72_CANGA RNA polymerase II subunit A C-ter...1984e-129     369     85     94GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
3Q75E60    281   SSU72_ASHGO RNA polymerase II subunit A C-ter...2063e-120     349     76     90GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
4Q6CQ61    207   SSU72_KLULA RNA polymerase II subunit A C-ter...2045e-119     343     77     88GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
5Q6C195    193   SSU72_YARLI RNA polymerase II subunit A C-ter...2006e-83     251     60     76GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
6Q6BYP7    223   SSU72_DEBHA RNA polymerase II subunit A C-ter...2187e-78     239     55     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
7O42868    197   SSU72_SCHPO RNA polymerase II subunit A C-ter...2009e-74     228     52     73GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006369; P:termination of RNA polymerase II transcription; ISS:PomBase.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PomBase.
8Q7SFY0    266   SSU72_NEUCR RNA polymerase II subunit A C-ter...2322e-62     201     46     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
9Q4IPC8    255   SSU72_GIBZE RNA polymerase II subunit A C-ter...2322e-61     198     46     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
10Q2HFZ9    257   SSU72_CHAGB RNA polymerase II subunit A C-ter...2322e-60     196     45     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
11Q4WHY5    287   SSU72_ASPFU RNA polymerase II subunit A C-ter...2347e-58     190     45     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
12Q2UPU5    262   SSU72_ASPOR RNA polymerase II subunit A C-ter...2341e-56     186     44     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
13P0CR76    187   SSU72_CRYNJ RNA polymerase II subunit A C-ter...1375e-54     177     60     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
14P0CR77    187   SSU72_CRYNB RNA polymerase II subunit A C-ter...1375e-54     177     60     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
15Q9CY97    194   SSU72_MOUSE RNA polymerase II subunit A C-ter...1915e-53     174     46     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
16Q5ZJQ7    194   SSU72_CHICK RNA polymerase II subunit A C-ter...1918e-53     174     47     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q17QI2    194   SSU72_BOVIN RNA polymerase II subunit A C-ter...1912e-52     173     46     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
18Q9NP77    194   SSU72_HUMAN RNA polymerase II subunit A C-ter...1914e-52     172     46     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
19Q4KLK9    194   SSU72_RAT RNA polymerase II subunit A C-termi...1914e-52     172     46     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
20Q6PC19    194   SSU72_DANRE RNA polymerase II subunit A C-ter...2066e-52     172     43     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
21Q6NRQ7    194   SSU72_XENLA RNA polymerase II subunit A C-ter...1912e-50     167     45     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
22A6NG73    194   S72L3_HUMAN Putative RNA polymerase II subuni...1617e-48     161     48     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
23A6NK39    194   S72L1_HUMAN Putative RNA polymerase II subuni...1679e-48     161     48     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
24A8MSY0    194   S72L2_HUMAN Putative RNA polymerase II subuni...1611e-46     158     47     66GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
25Q558Z3    214   SSU72_DICDI RNA polymerase II subunit A C-ter...1784e-45     155     44     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004721; F:phosphoprotein phosphatase activity; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
26Q38UF0    630   MNMG_LACSS tRNA uridine 5-carboxymethylaminom...724.3     32     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
GO:0055114; P:oxidation-reduction process; IEA:InterPro.::GO:0002098; P:tRNA wobble uridine modification; IEA:InterPro.
27Q5ZUT4    448   ASTB_LEGPH N-succinylarginine dihydrolase OS=...1204.6     31.6     27     43
GO:0009015; F:N-succinylarginine dihydrolase activity; IEA:EC.
GO:0006525; P:arginine metabolic process; IEA:UniProtKB-KW.
28A5ICK4    448   ASTB_LEGPC N-succinylarginine dihydrolase OS=...1204.6     31.6     27     43
GO:0009015; F:N-succinylarginine dihydrolase activity; IEA:EC.
GO:0006525; P:arginine metabolic process; IEA:UniProtKB-KW.
29Q5X4K3    448   ASTB_LEGPA N-succinylarginine dihydrolase OS=...1204.8     31.6     27     43
GO:0009015; F:N-succinylarginine dihydrolase activity; IEA:EC.
GO:0006525; P:arginine metabolic process; IEA:UniProtKB-KW.
30Q5WVZ3    448   ASTB_LEGPL N-succinylarginine dihydrolase OS=...1204.9     31.6     27     43
GO:0009015; F:N-succinylarginine dihydrolase activity; IEA:EC.
GO:0006525; P:arginine metabolic process; IEA:UniProtKB-KW.
records
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