Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL216W
Length:
827
Number of sequences:
5887
Description:
YNL216W RAP1 SGDID:S000005160, Chr XIV from 241689-244172, Genome Release 64-1-1, Verified ORF, "DNA-binding protein involved in either activation or repression of transcription, depending on binding site context; also binds telomere sequences and plays a role in telomeric position effect (silencing) and telomere structure"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P11938    827   RAP1_YEAST DNA-binding protein RAP1 OS=Saccha...8270     1711     100     100GO:0005635; C:nuclear envelope; IDA:SGD.::GO:0000783; C:nuclear telomere cap complex; IDA:SGD.
GO:0008301; F:DNA binding, bending; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:SGD.::GO:0042162; F:telomeric DNA binding; IDA:SGD.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0031848; P:protection from non-homologous end joining at telomere; IMP:SGD.::GO:0007004; P:telomere maintenance via telomerase; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q96TL7    693   RAP1_SCHPO DNA-binding protein rap1 OS=Schizo...940.32     38.1     28     50GO:0005724; C:nuclear telomeric heterochromatin; ISS:PomBase.::GO:0070187; C:telosome; ISS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; ISS:PomBase.
GO:0006348; P:chromatin silencing at telomere; IMP:PomBase.::GO:0045141; P:meiotic telomere clustering; IMP:PomBase.::GO:0031848; P:protection from non-homologous end joining at telomere; IGI:PomBase.::GO:0031860; P:telomeric 3' overhang formation; IGI:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:PomBase.
3Q6NYJ3    616   TE2IP_DANRE Telomeric repeat-binding factor 2...750.82     37     31     45GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0048239; P:negative regulation of DNA recombination at telomere; ISS:UniProtKB.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.::GO:0051092; P:positive regulation of NF-kappaB transcription factor activity; ISS:UniProtKB.::GO:0010569; P:regulation of double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0010833; P:telomere maintenance via telomere lengthening; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q9X3X7    1212   TOP1_ZYMMO DNA topoisomerase 1 OS=Zymomonas m...1201.3     36.2     28     50GO:0005694; C:chromosome; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003917; F:DNA topoisomerase type I activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006265; P:DNA topological change; IEA:InterPro.
5P47460    1805   HMW2_MYCGE Cytadherence high molecular weight...593.1     35.4     31     51
GO:0020035; P:cytoadherence to microvasculature, mediated by symbiont protein; IEA:UniProtKB-KW.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
6Q7Z2Z1    1910   TICRR_HUMAN Treslin OS=Homo sapiens (Human). ...459.3     33.5     36     58GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; ISS:UniProtKB.::GO:0006260; P:DNA replication; ISS:UniProtKB.::GO:0001731; P:formation of translation preinitiation complex; ISS:UniProtKB.::GO:0031576; P:G2/M transition checkpoint; ISS:UniProtKB.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; ISS:UniProtKB.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
7Q96276    219   MYB23_ARATH Transcription factor MYB23 OS=Ara...609.9     32.7     28     57GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0010053; P:root epidermal cell differentiation; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010091; P:trichome branching; IMP:TAIR.
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