rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P16523 | 270 | MER1_YEAST Meiotic recombination 1 protein OS... | 270 | 0 | 548 | 100 | 100 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:SGD. | | | | | | | | | | GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD. | 2 | P81021 | 1270 | VIGLN_CHICK Vigilin OS=Gallus gallus (Chicken... | 79 | 0.06 | 38.5 | 27 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 3 | Q5R439 | 1268 | VIGLN_PONAB Vigilin OS=Pongo abelii (Sumatran... | 73 | 0.13 | 37.4 | 23 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW. | 4 | Q9Z1A6 | 1268 | VIGLN_RAT Vigilin OS=Rattus norvegicus (Rat).... | 73 | 0.14 | 37.4 | 23 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW. | 5 | Q00341 | 1268 | VIGLN_HUMAN Vigilin OS=Homo sapiens (Human). ... | 73 | 0.14 | 37.4 | 23 | 56 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; TAS:ProtInc. | | | | | | | | | | GO:0008289; F:lipid binding; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008203; P:cholesterol metabolic process; TAS:ProtInc.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW. | 6 | Q8VDJ3 | 1268 | VIGLN_MOUSE Vigilin OS=Mus musculus (Mouse). ... | 73 | 0.15 | 37.4 | 23 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW. | 7 | P57721 | 371 | PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Hom... | 84 | 0.37 | 35.4 | 29 | 49 | GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0016071; P:mRNA metabolic process; NAS:UniProtKB. | 8 | O19048 | 356 | PCBP1_RABIT Poly(rC)-binding protein 1 OS=Ory... | 94 | 0.38 | 35.4 | 29 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 9 | P60335 | 356 | PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus... | 94 | 0.38 | 35.4 | 29 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:MGI.::GO:0008494; F:translation activator activity; TAS:MGI. | | | | | | | | | | GO:0006397; P:mRNA processing; TAS:MGI. | 10 | Q15365 | 356 | PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Hom... | 94 | 0.38 | 35.4 | 29 | 47 | GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome. | 11 | Q5E9A3 | 356 | PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos... | 94 | 0.38 | 35.4 | 29 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:AgBase.::GO:0003697; F:single-stranded DNA binding; ISS:AgBase. | | | | | | | | | | | 12 | Q32PX7 | 639 | FUBP1_RAT Far upstream element-binding protei... | 66 | 0.4 | 35.8 | 33 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 13 | P57722 | 371 | PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus... | 77 | 0.44 | 35.4 | 29 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 14 | Q91WJ8 | 651 | FUBP1_MOUSE Far upstream element-binding prot... | 66 | 0.62 | 35 | 33 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 15 | Q96AE4 | 644 | FUBP1_HUMAN Far upstream element-binding prot... | 66 | 0.62 | 35 | 33 | 53 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0010628; P:positive regulation of gene expression; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. | 16 | P44518 | 462 | SRP54_HAEIN Signal recognition particle prote... | 50 | 0.73 | 34.7 | 36 | 56 | GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. | | | | | | | | | | GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro. | 17 | P57724 | 403 | PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus... | 83 | 0.91 | 34.3 | 30 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 18 | P57723 | 403 | PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Hom... | 74 | 0.91 | 34.3 | 31 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | | 19 | Q0VCU0 | 403 | PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos... | 74 | 0.93 | 34.3 | 31 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 20 | Q5R5H8 | 464 | HNRPK_PONAB Heterogeneous nuclear ribonucleop... | 37 | 1.1 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | Q4R4M6 | 464 | HNRPK_MACFA Heterogeneous nuclear ribonucleop... | 37 | 1.1 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 22 | P61980 | 463 | HNRPK_RAT Heterogeneous nuclear ribonucleopro... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IDA:RGD. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 23 | P61979 | 463 | HNRPK_MOUSE Heterogeneous nuclear ribonucleop... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 24 | P61978 | 463 | HNRPK_HUMAN Heterogeneous nuclear ribonucleop... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0000790; C:nuclear chromatin; IDA:BHF-UCL.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IMP:BHF-UCL.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IMP:BHF-UCL.::GO:0003697; F:single-stranded DNA binding; TAS:BHF-UCL. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0045716; P:positive regulation of low-density lipoprotein particle receptor biosynthetic process; IMP:BHF-UCL.::GO:0048260; P:positive regulation of receptor-mediated endocytosis; IMP:BHF-UCL.::GO:0072369; P:regulation of lipid transport by positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0010988; P:regulation of low-density lipoprotein particle clearance; IMP:BHF-UCL.::GO:0007165; P:signal transduction; TAS:ProtInc. | 25 | Q3T0D0 | 464 | HNRPK_BOVIN Heterogeneous nuclear ribonucleop... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 26 | Q5ZIQ3 | 427 | HNRPK_CHICK Heterogeneous nuclear ribonucleop... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 27 | O19049 | 463 | HNRPK_RABIT Heterogeneous nuclear ribonucleop... | 37 | 1.2 | 34.3 | 43 | 65 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 28 | Q2GGA4 | 796 | PNP_EHRCR Polyribonucleotide nucleotidyltrans... | 58 | 1.5 | 33.9 | 34 | 59 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 29 | P0AGD7 | 453 | SRP54_ECOLI Signal recognition particle prote... | 59 | 1.6 | 33.9 | 34 | 53 | GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IDA:EcoliWiki.::GO:0003924; F:GTPase activity; IMP:EcoCyc. | | | | | | | | | | GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro. | 30 | P0AGD8 | 453 | SRP54_ECOL6 Signal recognition particle prote... | 59 | 1.6 | 33.9 | 34 | 53 | GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. | | | | | | | | | | GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro. | 31 | P0AGD9 | 453 | SRP54_ECO57 Signal recognition particle prote... | 59 | 1.6 | 33.9 | 34 | 53 | GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. | | | | | | | | | | GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro. |