UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL210W

Length:

270

Number of sequences:

5887

Description:

YNL210W MER1 SGDID:S000005154, Chr XIV from 250931-251743, Genome Release 64-1-1, Verified ORF, "Protein with RNA-binding motifs required for meiosis-specific mRNA splicing; required for chromosome pairing and meiotic recombination; Mer1p regulon embraces four essential meiotic pre-mRNAs: REC107, HFM1, AMA1 and SPO22"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	P0AGD9	453	SRP54_ECO57 Signal recognition particle prote...	59	1.6	33.9	34	53	GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
									GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
32	Q3YSC4	796	PNP_EHRCJ Polyribonucleotide nucleotidyltrans...	58	2.7	33.1	34	57	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
33	Q61990	362	PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus...	67	4.7	32.3	31	52	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0050687; P:negative regulation of defense response to virus; ISS:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
34	Q15366	365	PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Hom...	67	4.7	32.3	31	52	GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
									GO:0045087; P:innate immune response; TAS:Reactome.::GO:0050687; P:negative regulation of defense response to virus; IMP:UniProtKB.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
35	C4K0F4	748	PNP_RICPU Polyribonucleotide nucleotidyltrans...	80	6.9	32	31	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
36	C3PNK2	748	PNP_RICAE Polyribonucleotide nucleotidyltrans...	80	7.5	31.6	31	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
37	A8GS96	748	PNP_RICRS Polyribonucleotide nucleotidyltrans...	80	7.6	31.6	31	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
38	B0BXR0	748	PNP_RICRO Polyribonucleotide nucleotidyltrans...	80	7.6	31.6	31	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
39	Q55311	485	SRP54_SYNE7 Signal recognition particle prote...	50	7.8	31.6	32	56	GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
									GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
									GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
40	A7TT46	336	HEK2_VANPO Heterogeneous nuclear rnp K-like p...	75	8	31.6	27	51	GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
41	Q92HV7	749	PNP_RICCN Polyribonucleotide nucleotidyltrans...	80	9.9	31.6	31	49	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.

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