rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
91 | Q10193 | 275 | SRP1_SCHPO Pre-mRNA-splicing factor srp1 OS=S... | 45 | 1.5 | 35 | 38 | 58 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase. | 92 | C1BY64 | 155 | NCBP2_ESOLU Nuclear cap-binding protein subun... | 72 | 1.5 | 34.3 | 33 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB. | 93 | C0H859 | 155 | NCBP2_SALSA Nuclear cap-binding protein subun... | 72 | 1.5 | 34.3 | 33 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB. | 94 | P26378 | 380 | ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapie... | 87 | 1.5 | 35.4 | 36 | 49 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; TAS:ProtInc. | 95 | P90978 | 496 | U2AF2_CAEEL Splicing factor U2AF 65 kDa subun... | 70 | 1.6 | 35.4 | 33 | 53 | GO:0005681; C:spliceosomal complex; ISS:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:WormBase. | | | | | | | | | | GO:0048589; P:developmental growth; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0010172; P:embryonic body morphogenesis; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase. | 96 | Q61701 | 385 | ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul... | 87 | 1.6 | 35.4 | 36 | 49 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 97 | Q44556 | 94 | RBPD_NOSS1 Putative RNA-binding protein rbpD ... | 74 | 1.6 | 33.1 | 34 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 98 | O09032 | 373 | ELAV4_RAT ELAV-like protein 4 OS=Rattus norve... | 87 | 1.7 | 35.4 | 36 | 49 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 99 | Q99K48 | 473 | NONO_MOUSE Non-POU domain-containing octamer-... | 20 | 1.8 | 35.4 | 65 | 85 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 100 | Q5RFL9 | 471 | NONO_PONAB Non-POU domain-containing octamer-... | 20 | 1.8 | 35.4 | 65 | 85 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 101 | Q15233 | 471 | NONO_HUMAN Non-POU domain-containing octamer-... | 20 | 1.8 | 35.4 | 65 | 85 | GO:0016363; C:nuclear matrix; IDA:BHF-UCL.::GO:0042382; C:paraspeckles; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 102 | Q9GRX4 | 698 | NONA_DROLR Protein no-on-transient A OS=Droso... | 54 | 1.8 | 35.4 | 33 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 103 | Q5FVM4 | 476 | NONO_RAT Non-POU domain-containing octamer-bi... | 20 | 1.8 | 35.4 | 65 | 85 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 104 | P52299 | 153 | NCBP2_XENLA Nuclear cap-binding protein subun... | 71 | 2 | 33.9 | 32 | 51 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005845; C:mRNA cap binding complex; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000340; F:RNA 7-methylguanosine cap binding; ISS:UniProtKB. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; ISS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.::GO:0046833; P:positive regulation of RNA export from nucleus; IDA:UniProtKB.::GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IDA:UniProtKB.::GO:0006408; P:snRNA export from nucleus; IDA:UniProtKB. | 105 | Q08170 | 494 | SRSF4_HUMAN Serine/arginine-rich splicing fac... | 68 | 2 | 35 | 31 | 49 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 106 | Q6ZI17 | 848 | OML2_ORYSJ Protein MEI2-like 2 OS=Oryza sativ... | 105 | 2 | 35.4 | 33 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 107 | Q7SZT7 | 400 | ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la... | 87 | 2.3 | 35 | 37 | 47 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 108 | A4QNI8 | 400 | ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr... | 87 | 2.4 | 34.7 | 37 | 47 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 109 | P32385 | 249 | RNP1_YEAST Ribonucleoprotein 1 OS=Saccharomyc... | 21 | 2.5 | 34.3 | 62 | 76 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; IMP:SGD. | 110 | Q66H20 | 531 | PTBP2_RAT Polypyrimidine tract-binding protei... | 107 | 2.6 | 34.7 | 28 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 111 | Q91Z31 | 531 | PTBP2_MOUSE Polypyrimidine tract-binding prot... | 107 | 2.6 | 34.7 | 28 | 43 | GO:0005681; C:spliceosomal complex; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI. | 112 | P97379 | 482 | G3BP2_MOUSE Ras GTPase-activating protein-bin... | 70 | 2.6 | 34.7 | 36 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 113 | P0CR16 | 769 | MRD1_CRYNJ Multiple RNA-binding domain-contai... | 75 | 2.7 | 35 | 35 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 114 | P0CR17 | 769 | MRD1_CRYNB Multiple RNA-binding domain-contai... | 75 | 2.7 | 35 | 35 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 115 | Q5R9L3 | 482 | G3BP2_PONAB Ras GTPase-activating protein-bin... | 70 | 2.8 | 34.7 | 36 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 116 | Q9UN86 | 482 | G3BP2_HUMAN Ras GTPase-activating protein-bin... | 70 | 2.8 | 34.7 | 36 | 43 | GO:0005829; C:cytosol; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030159; F:receptor signaling complex scaffold activity; NAS:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0007253; P:cytoplasmic sequestering of NF-kappaB; NAS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0007265; P:Ras protein signal transduction; NAS:UniProtKB.::GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome. | 117 | Q9UKA9 | 531 | PTBP2_HUMAN Polypyrimidine tract-binding prot... | 107 | 3 | 34.7 | 28 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0033119; P:negative regulation of RNA splicing; IDA:UniProtKB. | 118 | Q03441 | 430 | RMD1_YEAST Sporulation protein RMD1 OS=Saccha... | 63 | 3.1 | 34.7 | 33 | 54 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW. | 119 | Q09702 | 529 | NRD1_SCHPO Negative regulator of differentiat... | 110 | 3.1 | 34.7 | 28 | 44 | GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0031138; P:negative regulation of conjugation with cellular fusion; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 120 | Q9GRW7 | 697 | NONA_DROVI Protein no-on-transient A OS=Droso... | 22 | 3.7 | 34.3 | 59 | 82 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 121 | Q54PB2 | 895 | MRD1_DICDI Multiple RNA-binding domain-contai... | 79 | 4.2 | 34.3 | 32 | 49 | GO:0005730; C:nucleolus; ISS:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030515; F:snoRNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:dictyBase. |