UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL182C

Length:

555

Number of sequences:

5887

Description:

YNL182C IPI3 SGDID:S000005126, Chr XIV from 297627-295960, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA; highly conserved and contains WD40 motifs; Rix1 complex associates with Mdn1p in pre-60S ribosomal particles"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
61	Q8VZY6	379	FIE2_MAIZE Polycomb group protein FIE2 OS=Zea...	76	0.29	37.4	29	51	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
62	Q5RE95	330	WDR5B_PONAB WD repeat-containing protein 5B O...	117	0.33	37	24	43
63	A7EKM8	458	LIS1_SCLS1 Nuclear distribution protein PAC1 ...	127	0.37	37.4	20	44	GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
64	P42841	465	PFS2_YEAST Polyadenylation factor subunit 2 O...	109	0.43	37	24	45	GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
									GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
65	Q86VZ2	330	WDR5B_HUMAN WD repeat-containing protein 5B O...	98	0.43	37	23	44
66	Q8C0J2	607	A16L1_MOUSE Autophagy-related protein 16-1 OS...	105	10	32.7	24	45	GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
									GO:0005515; F:protein binding; IPI:MGI.
									GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
67	Q6BVZ3	504	PFS2_DEBHA Polyadenylation factor subunit 2 O...	214	0.46	37	24	45	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
68	A8IR43	444	WDR12_CHLRE Ribosome biogenesis protein WDR12...	124	0.49	37	28	40	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
69	Q5UPG2	132	YL084_MIMIV Uncharacterized WD repeat-contain...	60	0.59	34.7	37	55
70	Q8NI36	951	WDR36_HUMAN WD repeat-containing protein 36 O...	154	0.59	37	21	43	GO:0032040; C:small-subunit processome; IEA:InterPro.
									GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:InterPro.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
71	O13982	399	YEC8_SCHPO Uncharacterized WD repeat-containi...	48	0.62	36.6	35	56	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
									GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
72	Q12417	451	PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...	112	0.71	36.2	27	43	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
73	P74442	1191	Y143_SYNY3 Uncharacterized WD repeat-containi...	77	0.83	36.2	27	51
74	P91341	910	PWP2_CAEEL Periodic tryptophan protein 2 homo...	61	5.7	33.5	28	54
									GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
75	Q9EPV5	1249	APAF_RAT Apoptotic protease-activating factor...	121	9.5	33.1	23	45	GO:0043293; C:apoptosome; IDA:RGD.
									GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0042802; F:identical protein binding; IDA:RGD.
									GO:0007568; P:aging; IEP:RGD.::GO:0007420; P:brain development; IEP:RGD.::GO:0010659; P:cardiac muscle cell apoptotic process; IMP:RGD.::GO:0030154; P:cell differentiation; IEP:RGD.::GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:RGD.::GO:0006952; P:defense response; IEA:InterPro.::GO:0034349; P:glial cell apoptotic process; IEP:RGD.::GO:0006917; P:induction of apoptosis; IDA:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0007584; P:response to nutrient; IEP:RGD.
76	Q8C4J7	801	TBL3_MOUSE Transducin beta-like protein 3 OS=...	155	1	35.8	25	41	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:InterPro.
77	Q6FJS0	455	PFS2_CANGA Polyadenylation factor subunit 2 O...	106	1.1	35.8	25	46	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
78	Q91854	518	TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...	118	1.2	35.8	22	49
									GO:0046983; F:protein dimerization activity; IEA:InterPro.
									GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
79	Q54SF9	941	MHCKD_DICDI Myosin heavy chain kinase D OS=Di...	147	2.5	34.7	26	38
									GO:0005524; F:ATP binding; IC:dictyBase.::GO:0016905; F:myosin heavy chain kinase activity; ISS:dictyBase.
									GO:0031037; P:myosin II filament disassembly; IMP:dictyBase.
80	P53196	417	RPN14_YEAST 26S proteasome regulatory subunit...	116	1.5	35	28	44	GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0070682; P:proteasome regulatory particle assembly; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
81	Q16K15	326	EIF3I_AEDAE Eukaryotic translation initiation...	86	1.7	34.7	34	51	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
82	Q54RP0	648	AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...	89	1.8	35	29	45	GO:0005737; C:cytoplasm; TAS:dictyBase.
									GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
									GO:0006486; P:protein glycosylation; IDA:dictyBase.
83	Q5U2W5	800	TBL3_RAT Transducin beta-like protein 3 OS=Ra...	153	1.9	35	24	42	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
									GO:0006364; P:rRNA processing; IEA:InterPro.
84	Q7RY68	660	PFS2_NEUCR Polyadenylation factor subunit 2 O...	258	2.1	35	22	43	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
85	D3BUN1	417	LIS1_POLPA Lissencephaly-1 homolog OS=Polysph...	87	2.2	34.7	30	44	GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
86	Q8NBT0	407	POC1A_HUMAN POC1 centriolar protein homolog A...	100	2.3	34.7	29	46	GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
87	Q4P5F5	455	CIAO1_USTMA Probable cytosolic iron-sulfur pr...	173	2.4	34.7	23	40
88	Q676U5	607	A16L1_HUMAN Autophagy-related protein 16-1 OS...	105	6.2	33.5	25	45	GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
89	Q2H139	657	MDV1_CHAGB Mitochondrial division protein 1 O...	91	2.6	34.7	32	44	GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
90	Q12220	943	UTP12_YEAST U3 small nucleolar RNA-associated...	89	2.6	34.7	30	49	GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
									GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
91	O88879	1249	APAF_MOUSE Apoptotic protease-activating fact...	175	2.9	34.7	25	41	GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
									GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
									GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.

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