Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL182C
Length:
555
Number of sequences:
5887
Description:
YNL182C IPI3 SGDID:S000005126, Chr XIV from 297627-295960, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) that is required for processing of ITS2 sequences from 35S pre-rRNA; highly conserved and contains WD40 motifs; Rix1 complex associates with Mdn1p in pre-60S ribosomal particles"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53877    555   IPI3_YEAST Pre-rRNA-processing protein IPI3 O...5550     1144     100     100GO:0005654; C:nucleoplasm; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.
2A6ZRQ4    555   IPI3_YEAS7 Pre-rRNA-processing protein IPI3 O...5550     1134     99     99GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
3Q6FNJ1    528   IPI3_CANGA Pre-rRNA-processing protein IPI3 O...5575e-164     484     46     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
4Q6CRK4    508   IPI3_KLULA Pre-rRNA-processing protein IPI3 O...5681e-146     439     44     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
5Q75E14    518   IPI3_ASHGO Pre-rRNA-processing protein IPI3 O...5665e-140     422     44     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
6Q6BMP5    515   IPI3_DEBHA Pre-rRNA-processing protein IPI3 O...5882e-63     222     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
7Q5AB15    505   IPI3_CANAL Pre-rRNA-processing protein IPI3 O...5592e-57     206     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
8A5DTA8    521   IPI3_LODEL Pre-rRNA-processing protein IPI3 O...5686e-56     201     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
9A3LNM0    525   IPI3_PICST Pre-rRNA-processing protein IPI3 O...5641e-54     198     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
10A5DNK9    451   IPI3_PICGU Pre-rRNA-processing protein IPI3 O...5595e-51     186     28     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11Q6C953    426   IPI3_YARLI Pre-rRNA-processing protein IPI3 O...4734e-26     114     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
12Q4PHV3    587   IPI3_USTMA Pre-rRNA-processing protein IPI3 O...4071e-22     105     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
13Q10272    446   IPI3_SCHPO Pre-rRNA-processing protein crb3/i...3722e-20     97.8     26     42GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
14Q68EI0    431   WDR18_DANRE WD repeat-containing protein 18 O...3862e-16     85.1     23     43
GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; IMP:UniProtKB.
15Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...3440.0000000000003     75.5     24     43
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
16Q499N3    431   WDR18_RAT WD repeat-containing protein 18 OS=...3460.000000000008     70.9     23     40
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
17Q4VBE8    431   WDR18_MOUSE WD repeat-containing protein 18 O...3450.00000000002     69.7     22     40
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
18Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...3440.00000000005     68.6     23     42
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
19Q22006    529   PRO1_CAEEL Pre-rRNA-processing protein pro-1 ...2640.000000002     63.5     28     42GO:0005654; C:nucleoplasm; ISS:WormBase.
GO:0016477; P:cell migration; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0007506; P:gonadal mesoderm development; IEA:UniProtKB-KW.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006364; P:rRNA processing; IMP:WormBase.
20A8WSU9    532   PRO1_CAEBR Pre-rRNA-processing protein pro-1 ...2750.00000003     60.1     27     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007506; P:gonadal mesoderm development; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
21Q5RFQ3    918   PWP2_PONAB Periodic tryptophan protein 2 homo...1470.00004     50.1     24     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
22Q15269    919   PWP2_HUMAN Periodic tryptophan protein 2 homo...1470.00005     50.1     24     41GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0004871; F:signal transducer activity; TAS:ProtInc.
23P58404    760   STRN4_MOUSE Striatin-4 OS=Mus musculus (Mouse...2920.00008     49.3     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
24Q9NRL3    753   STRN4_HUMAN Striatin-4 OS=Homo sapiens (Human...2920.0002     47.8     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.
25Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...900.0009     45.8     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
26Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...1490.001     45.4     23     41
27B2VWG7    461   LIS1_PYRTR Nuclear distribution protein PAC1 ...1270.002     44.7     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
28Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...1200.002     45.1     26     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
29A4R3M4    461   LIS1_MAGO7 Nuclear distribution protein PAC1 ...1280.002     44.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
30Q00664    444   LIS1_EMENI Nuclear distribution protein nudF ...1870.002     44.3     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
31Q4ICM0    464   LIS1_GIBZE Nuclear distribution protein PAC1 ...1270.003     43.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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