| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
571 | Q86SE5 | 291 | RALYL_HUMAN RNA-binding Raly-like protein OS=... | 81 | 0.38 | 36.2 | 30 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 572 | O35698 | 380 | RBY1A_MOUSE RNA-binding motif protein, Y chro... | 65 | 0.39 | 36.6 | 28 | 54 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 573 | Q62189 | 287 | SNRPA_MOUSE U1 small nuclear ribonucleoprotei... | 83 | 0.4 | 36.2 | 28 | 49 | GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 574 | Q8BTF8 | 293 | RALYL_MOUSE RNA-binding Raly-like protein OS=... | 81 | 0.4 | 36.2 | 30 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 575 | Q6K4N0 | 185 | RSZ21_ORYSJ Serine/arginine-rich splicing fac... | 59 | 0.42 | 35.4 | 37 | 54 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 576 | Q1HQN4 | 272 | EIF3G_AEDAE Eukaryotic translation initiation... | 71 | 0.43 | 36.2 | 30 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 577 | P37838 | 685 | NOP4_YEAST Nucleolar protein 4 OS=Saccharomyc... | 99 | 4.6 | 33.1 | 27 | 48 | GO:0005730; C:nucleolus; TAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; TAS:SGD. | 578 | Q16630 | 551 | CPSF6_HUMAN Cleavage and polyadenylation spec... | 118 | 0.44 | 36.6 | 27 | 47 | GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB.::GO:0042382; C:paraspeckles; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0051262; P:protein tetramerization; IDA:UniProtKB. | 579 | Q0P5D2 | 551 | CPSF6_BOVIN Cleavage and polyadenylation spec... | 118 | 0.44 | 36.6 | 27 | 47 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 580 | Q4R979 | 364 | RBM4_MACFA RNA-binding protein 4 OS=Macaca fa... | 91 | 0.44 | 36.2 | 22 | 52 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB. | 581 | Q9BWF3 | 364 | RBM4_HUMAN RNA-binding protein 4 OS=Homo sapi... | 91 | 0.44 | 36.2 | 22 | 52 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB. | | | | | | | | | | GO:0035198; F:miRNA binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; IDA:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; IDA:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; IDA:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; IDA:UniProtKB. | 582 | Q6VY05 | 352 | DND1_MOUSE Dead end protein homolog 1 OS=Mus ... | 121 | 0.44 | 36.2 | 27 | 41 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:MGI.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0060965; P:negative regulation of gene silencing by miRNA; ISS:UniProtKB. | 583 | Q5AHI7 | 454 | NOP12_CANAL Nucleolar protein 12 OS=Candida a... | 61 | 0.47 | 36.2 | 33 | 51 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 584 | P38996 | 802 | NAB3_YEAST Nuclear polyadenylated RNA-binding... | 140 | 0.47 | 36.6 | 26 | 44 | GO:0035649; C:Nrd1 complex; IDA:SGD.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001068; F:transcription regulatory region RNA binding; IDA:SGD. | | | | | | | | | | GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IPI:SGD.::GO:0030847; P:termination of RNA polymerase II transcription, exosome-dependent; IMP:SGD. | 585 | A7EWN6 | 288 | EIF3G_SCLS1 Eukaryotic translation initiation... | 99 | 0.48 | 35.8 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 586 | A6SGN8 | 288 | EIF3G_BOTFB Eukaryotic translation initiation... | 99 | 0.48 | 35.8 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 587 | Q08DJ0 | 293 | RALYL_BOVIN RNA-binding Raly-like protein OS=... | 93 | 0.48 | 35.8 | 29 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 588 | Q8CFD1 | 476 | RBM45_RAT RNA-binding protein 45 OS=Rattus no... | 100 | 0.49 | 36.2 | 27 | 49 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEP:UniProtKB. | 589 | Q8C7Q4 | 361 | RBM4_MOUSE RNA-binding protein 4 OS=Mus muscu... | 91 | 0.49 | 36.2 | 22 | 52 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; IDA:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB. | 590 | Q9UX95 | 119 | RL24_SULSO 50S ribosomal protein L24P OS=P2).... | 116 | 0.49 | 34.3 | 30 | 49 | GO:0015934; C:large ribosomal subunit; IEA:InterPro. | | | | | | | | | | GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 591 | Q58EA2 | 256 | THO4A_XENLA THO complex subunit 4-A OS=Xenopu... | 95 | 0.5 | 35.8 | 25 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 592 | Q5ZL34 | 551 | CPSF6_CHICK Cleavage and polyadenylation spec... | 130 | 0.51 | 36.2 | 27 | 46 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 593 | P23588 | 611 | IF4B_HUMAN Eukaryotic translation initiation ... | 90 | 5 | 33.1 | 26 | 49 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016281; C:eukaryotic translation initiation factor 4F complex; TAS:ProtInc. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:ProtInc. | | | | | | | | | | GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006446; P:regulation of translational initiation; TAS:ProtInc. | 594 | P38760 | 659 | MIP6_YEAST RNA-binding protein MIP6 OS=Saccha... | 89 | 0.51 | 36.2 | 25 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IPI:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IPI:SGD. | 595 | Q28FB9 | 260 | THOC4_XENTR THO complex subunit 4 OS=Xenopus ... | 95 | 0.52 | 35.8 | 25 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 596 | Q86V81 | 257 | THOC4_HUMAN THO complex subunit 4 OS=Homo sap... | 92 | 0.52 | 35.8 | 26 | 52 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0000346; C:transcription export complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 597 | Q9Y7R4 | 920 | SET1_SCHPO Histone-lysine N-methyltransferase... | 96 | 0.52 | 36.2 | 24 | 46 | GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase. | | | | | | | | | | GO:0042800; F:histone methyltransferase activity (H3-K4 specific); TAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000077; P:DNA damage checkpoint; IGI:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000723; P:telomere maintenance; IMP:PomBase. | 598 | Q9GRW7 | 697 | NONA_DROVI Protein no-on-transient A OS=Droso... | 76 | 0.52 | 36.2 | 37 | 57 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 599 | Q9BQ04 | 359 | RBM4B_HUMAN RNA-binding protein 4B OS=Homo sa... | 91 | 0.53 | 35.8 | 22 | 52 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 600 | Q3MHX3 | 362 | RBM4_BOVIN RNA-binding protein 4 OS=Bos tauru... | 91 | 0.54 | 35.8 | 22 | 52 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB. | | | | | | | | | | GO:0035198; F:miRNA binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0032922; P:circadian regulation of gene expression; ISS:UniProtKB.::GO:0043153; P:entrainment of circadian clock by photoperiod; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0032055; P:negative regulation of translation in response to stress; ISS:UniProtKB.::GO:0035278; P:negative regulation of translation involved in gene silencing by miRNA; ISS:UniProtKB.::GO:0045947; P:negative regulation of translational initiation; ISS:UniProtKB.::GO:0051149; P:positive regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0046822; P:regulation of nucleocytoplasmic transport; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0051403; P:stress-activated MAPK cascade; ISS:UniProtKB. | 601 | Q9BRL6 | 282 | SRSF8_HUMAN Serine/arginine-rich splicing fac... | 90 | 0.54 | 35.8 | 23 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
