UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL138W-A

Length:

85

Number of sequences:

5887

Description:

YNL138W-A YSF3 SGDID:S000028509, Chr XIV from 366033-366035,366158-366412, Genome Release 64-1-1, Verified ORF, "Component of the SF3b subcomplex of the U2 snRNP, essential protein required for for splicing and for assembly of SF3b"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P0C074	85	YSF3_YEAST RDS3 complex subunit 10 OS=Sacchar...	85	5e-56	173	100	100	GO:0005686; C:U2 snRNP; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0000245; P:spliceosomal complex assembly; IMP:SGD.
2	Q9P7R6	85	YHV5_SCHPO Uncharacterized protein C211.05 OS...	74	0.000002	45.8	34	65	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; ISS:PomBase.
									GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
3	Q9VHI4	85	SF3B5_DROME Probable splicing factor 3B subun...	59	0.001	37.7	32	53	GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
									GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.
4	Q9BWJ5	86	SF3B5_HUMAN Splicing factor 3B subunit 5 OS=H...	59	0.005	35.8	31	51	GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.
5	Q56K13	86	SF3B5_BOVIN Splicing factor 3B subunit 5 OS=B...	59	0.005	35.8	31	51
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6	P58728	87	SF3BB_ARATH Uncharacterized protein At4g14342...	59	0.006	35.4	27	53
7	Q923D4	86	SF3B5_MOUSE Splicing factor 3B subunit 5 OS=M...	59	0.007	35.4	31	51
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8	Q9LW64	87	SF3BA_ARATH Uncharacterized protein At3g23325...	59	0.01	35	27	53
9	Q55BF5	94	SF3B5_DICDI Splicing factor 3B subunit 5 OS=D...	65	0.038	33.5	28	49	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; ISS:dictyBase.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10	Q6BVZ3	504	PFS2_DEBHA Polyadenylation factor subunit 2 O...	52	5.2	28.9	29	52	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.

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