Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YNL113W
Length:
142
Number of sequences:
5887
Description:
YNL113W RPC19 SGDID:S000005057, Chr XIV from 412771-413199, Genome Release 64-1-1, Verified ORF, "RNA polymerase subunit AC19, common to RNA polymerases I and III"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P28000    142   RPAC2_YEAST DNA-directed RNA polymerases I an...1425e-100     290     100     100GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006360; P:transcription from RNA polymerase I promoter; IC:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2Q09177    125   RPAC2_SCHPO DNA-directed RNA polymerases I an...1091e-39     135     62     72GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IGI:PomBase.
3Q1RMG8    133   RPAC2_BOVIN DNA-directed RNA polymerases I an...1193e-32     117     47     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
4Q9Y2S0    133   RPAC2_HUMAN DNA-directed RNA polymerases I an...1199e-31     113     45     66GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
5P97304    133   RPAC2_MOUSE DNA-directed RNA polymerases I an...1192e-30     112     45     66GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
6Q5XK67    114   RPAC2_XENLA DNA-directed RNA polymerases I an...1008e-28     105     48     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
7Q6DRI4    112   RPAC2_DANRE DNA-directed RNA polymerases I an...911e-23     94     48     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
8Q54ES6    116   RPC19_DICDI DNA-directed RNA polymerases I an...796e-23     92.4     52     70GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
9Q9VIZ0    105   RPAC2_DROME Probable DNA-directed RNA polymer...705e-19     81.6     51     71GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:UniProtKB.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:UniProtKB.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:UniProtKB.
10P34476    144   RPAC2_CAEEL Probable DNA-directed RNA polymer...1153e-16     75.5     30     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
11Q9VJE4    117   RPB11_DROME DNA-directed RNA polymerase II su...930.000000000000001     72.8     37     60GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase.
12Q9XVH6    122   RPB11_CAEEL Probable DNA-directed RNA polymer...810.000000000000002     72.8     43     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
13Q7PVQ9    117   RPB11_ANOGA DNA-directed RNA polymerase II su...820.000000000000002     72.4     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
14Q60SM4    122   RPB11_CAEBR Probable DNA-directed RNA polymer...810.000000000000008     70.9     42     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
15Q61IX2    145   RPAC2_CAEBR Probable DNA-directed RNA polymer...950.00000000000002     70.1     31     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
16Q86JJ5    120   RPB11_DICDI DNA-directed RNA polymerase II su...820.0000000000002     67     37     65GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase.
17O08740    117   RPB11_MOUSE DNA-directed RNA polymerase II su...780.0000000000006     65.5     38     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
18P52435    117   RPB11_HUMAN DNA-directed RNA polymerase II su...780.0000000000007     65.5     38     62GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0030275; F:LRR domain binding; IPI:UniProtKB.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
19Q32P79    117   RPB11_BOVIN DNA-directed RNA polymerase II su...780.0000000000007     65.5     38     62GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
20Q9GZM3    115   RPB1B_HUMAN DNA-directed RNA polymerase II su...760.000000000008     62.4     37     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
21Q9H1A7    115   RPB1C_HUMAN DNA-directed RNA polymerase II su...760.00000000002     61.2     36     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
22Q38859    116   RPB11_ARATH DNA-directed RNA polymerase II su...770.0000000002     58.5     32     61GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.::GO:0000418; C:DNA-directed RNA polymerase IV complex; IPI:TAIR.::GO:0000419; C:DNA-directed RNA polymerase V complex; IPI:TAIR.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
23P46217    90   RPOL_SULAC DNA-directed RNA polymerase subuni...590.000000003     54.7     42     64
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
24Q96YA7    93   RPOL_SULTO DNA-directed RNA polymerase subuni...800.00000003     52     36     60
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
25Q8IER7    126   RPB11_PLAF7 Probable DNA-directed RNA polymer...930.0000002     49.7     30     51GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:GeneDB_Pfalciparum.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:GeneDB_Pfalciparum.
26Q4YZZ7    126   RPB11_PLABA Probable DNA-directed RNA polymer...860.0000003     49.3     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
27Q4XS21    126   RPB11_PLACH Probable DNA-directed RNA polymer...860.000001     48.1     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
28Q980K0    92   RPOL_SULSO DNA-directed RNA polymerase subuni...800.000009     44.7     31     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
29P38902    120   RPB11_YEAST DNA-directed RNA polymerase II su...1020.00001     45.1     29     48GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006369; P:termination of RNA polymerase II transcription; IMP:SGD.
30Q8U4N1    95   RPOL_PYRFU DNA-directed RNA polymerase subuni...810.00001     44.7     32     49
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
31Q57832    99   RPOL_METJA DNA-directed RNA polymerase subuni...840.00002     44.3     29     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
records
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