UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YNL110C

Length:

220

Number of sequences:

5887

Description:

YNL110C NOP15 SGDID:S000005054, Chr XIV from 418488-417826, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis; localizes to both nucleolus and cytoplasm"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P53927	220	NOP15_YEAST Ribosome biogenesis protein 15 OS...	220	5e-158	443	100	100	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000915; P:cytokinesis, actomyosin contractile ring assembly; IMP:SGD.::GO:0042273; P:ribosomal large subunit biogenesis; IPI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
2	O74978	276	YQL5_SCHPO Uncharacterized RNA-binding protei...	161	9e-30	116	37	63	GO:0005730; C:nucleolus; IDA:PomBase.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0042254; P:ribosome biogenesis; ISS:PomBase.
3	Q3SZM1	296	MK67I_BOVIN MKI67 FHA domain-interacting nucl...	107	2e-20	91.3	41	64	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
4	Q8JIY8	269	MK67I_DANRE MKI67 FHA domain-interacting nucl...	176	8e-20	89	34	51	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
5	Q6GL69	276	MK67I_XENTR MKI67 FHA domain-interacting nucl...	148	9e-19	85.9	32	53	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
6	Q9BYG3	293	MK67I_HUMAN MKI67 FHA domain-interacting nucl...	105	1e-17	83.2	37	62	GO:0000794; C:condensed nuclear chromosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.
									GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.::GO:0006461; P:protein complex assembly; NAS:UniProtKB.::GO:0016072; P:rRNA metabolic process; NAS:UniProtKB.::GO:0009303; P:rRNA transcription; NAS:UniProtKB.
7	Q5RJM0	271	MK67I_RAT MKI67 FHA domain-interacting nucleo...	80	2e-17	82.4	43	66	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
8	Q91VE6	317	MK67I_MOUSE MKI67 FHA domain-interacting nucl...	79	2e-16	79.7	42	65	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
9	Q7SYS2	278	MK67I_XENLA MKI67 FHA domain-interacting nucl...	108	4e-16	78.2	37	56	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
10	Q9SD61	352	C3H42_ARATH Zinc finger CCCH domain-containin...	75	0.00000004	56.2	31	61
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
11	Q10B98	312	C3H25_ORYSJ Zinc finger CCCH domain-containin...	75	0.0000001	54.7	29	63
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
12	P39697	212	RT19_ARATH 40S ribosomal protein S19, mitocho...	95	0.0000002	53.1	34	48	GO:0005763; C:mitochondrial small ribosomal subunit; IDA:TAIR.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
									GO:0006412; P:translation; NAS:TAIR.
13	P42696	430	RBM34_HUMAN RNA-binding protein 34 OS=Homo sa...	90	0.0000003	53.9	32	56	GO:0005730; C:nucleolus; IDA:HPA.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
14	Q5M9F1	428	RBM34_RAT RNA-binding protein 34 OS=Rattus no...	90	0.0000003	53.9	33	54	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
15	Q8C5L7	375	RBM34_MOUSE RNA-binding protein 34 OS=Mus mus...	90	0.0000003	53.5	32	54	GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
16	O94290	217	IST3_SCHPO U2 snRNP component ist3 OS=Schizos...	75	0.0000003	52.8	29	61	GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0000245; P:spliceosomal complex assembly; ISS:PomBase.
17	Q5AJS6	841	MRD1_CANAL Multiple RNA-binding domain-contai...	36	0.62	34.7	39	69	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
18	Q9ZQA8	609	PABPX_ARATH Probable polyadenylate-binding pr...	136	0.14	36.6	29	46	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
19	O64380	660	PABP3_ARATH Polyadenylate-binding protein 3 O...	65	0.47	35	26	58
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IGI:TAIR.
20	Q9V535	165	RBM8A_DROME RNA-binding protein 8A OS=Drosoph...	122	0.0000008	50.8	24	53	GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0035145; C:exon-exon junction complex; IPI:FlyBase.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:FlyBase.::GO:0046595; P:establishment of pole plasm mRNA localization; TAS:FlyBase.::GO:0000226; P:microtubule cytoskeleton organization; IMP:FlyBase.::GO:0006406; P:mRNA export from nucleus; NAS:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0007312; P:oocyte nucleus migration involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; TAS:FlyBase.::GO:0007317; P:regulation of pole plasm oskar mRNA localization; IMP:FlyBase.
21	Q57014	101	RBPA_SYNY3 Putative RNA-binding protein rbpA ...	72	0.000001	49.3	33	57
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
22	Q9Y388	322	RBMX2_HUMAN RNA-binding motif protein, X-link...	75	0.000001	51.6	28	59
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
23	O43040	363	CTF1_SCHPO Cleavage and termination factor 1 ...	91	0.000001	52	26	54	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006378; P:mRNA polyadenylation; IC:PomBase.
24	Q8R0F5	326	RBMX2_MOUSE RNA-binding motif protein, X-link...	76	0.000001	51.6	29	59
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
25	Q04836	329	ROC3_ARATH 31 kDa ribonucleoprotein, chloropl...	74	0.003	41.6	27	53	GO:0009941; C:chloroplast envelope; IDA:TAIR.::GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0009535; C:chloroplast thylakoid membrane; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:TAIR.
									GO:0045087; P:innate immune response; IDA:TAIR.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0009451; P:RNA modification; IMP:TAIR.
26	Q05196	682	PABP5_ARATH Polyadenylate-binding protein 5 O...	61	1.4	33.5	34	49	GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:TAIR.
									GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IGI:TAIR.::GO:0006413; P:translational initiation; IGI:TAIR.
27	P98179	157	RBM3_HUMAN Putative RNA-binding protein 3 OS=...	82	0.000002	49.3	33	55	GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc.
									GO:0045727; P:positive regulation of translation; ISS:UniProtKB.
28	Q44554	103	RBPB_NOSS1 Putative RNA-binding protein rbpB ...	72	0.000002	48.5	33	58
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
29	Q10422	297	YDC1_SCHPO Uncharacterized RNA-binding protei...	94	0.000002	50.8	32	49	GO:0005634; C:nucleus; IDA:PomBase.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
30	Q6CEW9	828	MRD1_YARLI Multiple RNA-binding domain-contai...	87	0.005	41.2	31	52	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
31	Q1DXH0	768	PABP_COCIM Polyadenylate-binding protein, cyt...	67	0.018	39.3	31	54	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.

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