| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
421 | P26368 | 475 | U2AF2_HUMAN Splicing factor U2AF 65 kDa subun... | 58 | 0.022 | 38.9 | 31 | 53 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 422 | P26369 | 475 | U2AF2_MOUSE Splicing factor U2AF 65 kDa subun... | 58 | 0.023 | 38.9 | 31 | 53 | GO:0016607; C:nuclear speck; TAS:UniProtKB. | | | | | | | | | | GO:0070742; F:C2H2 zinc finger domain binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IDA:UniProtKB. | 423 | Q08170 | 494 | SRSF4_HUMAN Serine/arginine-rich splicing fac... | 72 | 0.024 | 38.9 | 32 | 51 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 424 | Q8VE97 | 489 | SRSF4_MOUSE Serine/arginine-rich splicing fac... | 72 | 0.026 | 38.9 | 32 | 51 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 425 | Q96IZ5 | 413 | RBM41_HUMAN RNA-binding protein 41 OS=Homo sa... | 73 | 0.026 | 38.9 | 32 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 426 | F4I3B3 | 445 | RB47A_ARATH Polyadenylate-binding protein RBP... | 65 | 0.03 | 38.5 | 31 | 54 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 427 | Q6P616 | 417 | RBM22_XENTR Pre-mRNA-splicing factor RBM22 OS... | 74 | 0.031 | 38.5 | 27 | 53 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0036002; F:pre-mRNA binding; ISS:UniProtKB.::GO:0017069; F:snRNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:UniProtKB.::GO:0033120; P:positive regulation of RNA splicing; ISS:UniProtKB. | 428 | Q9FVQ1 | 557 | NUCL1_ARATH Nucleolin 1 OS=Arabidopsis thalia... | 74 | 0.031 | 38.5 | 23 | 54 | GO:0005730; C:nucleolus; IDA:TAIR. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0010588; P:cotyledon vascular tissue pattern formation; IMP:TAIR.::GO:0000478; P:endonucleolytic cleavage involved in rRNA processing; IMP:TAIR.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0010305; P:leaf vascular tissue pattern formation; IMP:TAIR.::GO:0080056; P:petal vascular tissue pattern formation; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0080057; P:sepal vascular tissue pattern formation; IMP:TAIR. | 429 | A5DM21 | 631 | PABP_PICGU Polyadenylate-binding protein, cyt... | 82 | 0.31 | 35.4 | 28 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 430 | Q02926 | 471 | RB97D_DROME Ribonucleoprotein RB97D OS=Drosop... | 47 | 0.031 | 38.5 | 38 | 60 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007286; P:spermatid development; IMP:FlyBase. | 431 | Q9XSR3 | 592 | RBM47_CANFA RNA-binding protein 47 OS=Canis f... | 75 | 0.27 | 35.8 | 33 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 432 | P38760 | 659 | MIP6_YEAST RNA-binding protein MIP6 OS=Saccha... | 76 | 0.098 | 37 | 26 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IPI:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IPI:SGD. | 433 | A3LVD5 | 347 | ESF2_PICST Pre-rRNA-processing protein ESF2 O... | 123 | 0.033 | 38.5 | 28 | 50 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 434 | O60176 | 473 | YG41_SCHPO Uncharacterized RNA-binding protei... | 65 | 0.2 | 36.2 | 31 | 49 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0071004; C:U2-type prespliceosome; ISS:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:PomBase. | 435 | P07909 | 365 | ROA1_DROME Heterogeneous nuclear ribonucleopr... | 115 | 0.034 | 38.1 | 26 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 436 | O57437 | 286 | DAZLA_XENLA Deleted in azoospermia-like-A OS=... | 42 | 0.035 | 38.1 | 38 | 69 | GO:0032019; C:mitochondrial cloud; IDA:UniProtKB.::GO:0045495; C:pole plasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0008494; F:translation activator activity; IDA:UniProtKB. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:UniProtKB.::GO:0008354; P:germ cell migration; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0045948; P:positive regulation of translational initiation; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 437 | P19684 | 324 | ROC5_NICSY 33 kDa ribonucleoprotein, chloropl... | 97 | 0.15 | 36.2 | 27 | 46 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 438 | Q8VIJ6 | 699 | SFPQ_MOUSE Splicing factor, proline- and glut... | 101 | 0.035 | 38.5 | 27 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 439 | Q09442 | 388 | SF3B4_CAEEL Splicing factor 3B subunit 4 OS=C... | 72 | 0.035 | 38.1 | 32 | 53 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 440 | P23246 | 707 | SFPQ_HUMAN Splicing factor, proline- and glut... | 101 | 0.037 | 38.5 | 27 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IDA:BHF-UCL.::GO:0042382; C:paraspeckles; IDA:BHF-UCL. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IMP:BHF-UCL.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 441 | P45429 | 282 | SNRPA_XENLA U1 small nuclear ribonucleoprotei... | 65 | 0.037 | 38.1 | 37 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 442 | Q9JJ54 | 353 | HNRPD_RAT Heterogeneous nuclear ribonucleopro... | 47 | 3 | 32.3 | 30 | 55 | GO:0005829; C:cytosol; IDA:RGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; TAS:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0042162; F:telomeric DNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0048255; P:mRNA stabilization; IDA:RGD.::GO:0000291; P:nuclear-transcribed mRNA catabolic process, exonucleolytic; TAS:RGD.::GO:0006913; P:nucleocytoplasmic transport; TAS:RGD. | 443 | Q4V7Y4 | 286 | DAZLB_XENLA Deleted in azoospermia-like-B OS=... | 41 | 0.038 | 38.1 | 39 | 71 | GO:0032019; C:mitochondrial cloud; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008494; F:translation activator activity; ISS:UniProtKB. | | | | | | | | | | GO:0007281; P:germ cell development; ISS:UniProtKB.::GO:0008354; P:germ cell migration; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0045948; P:positive regulation of translational initiation; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW. | 444 | Q66II8 | 471 | RU17_XENTR U1 small nuclear ribonucleoprotein... | 56 | 0.041 | 38.1 | 29 | 59 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 445 | Q93W34 | 415 | RP45C_ARATH Polyadenylate-binding protein RBP... | 62 | 4.6 | 32 | 26 | 53 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 446 | P43332 | 216 | SNRPA_DROME U1 small nuclear ribonucleoprotei... | 80 | 0.043 | 37.7 | 30 | 51 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.::GO:0005685; C:U1 snRNP; ISS:FlyBase.::GO:0005686; C:U2 snRNP; ISS:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0035614; F:snRNA stem-loop binding; IDA:FlyBase.::GO:0030619; F:U1 snRNA binding; IDA:FlyBase.::GO:0030620; F:U2 snRNA binding; IDA:FlyBase. | | | | | | | | | | GO:0019099; P:female germ-line sex determination; NAS:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0007539; P:primary sex determination, soma; NAS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 447 | Q7SXP4 | 257 | SRS1A_DANRE Serine/arginine-rich splicing fac... | 72 | 0.044 | 37.7 | 29 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 448 | Q5R7H2 | 248 | SRSF1_PONAB Serine/arginine-rich splicing fac... | 72 | 0.045 | 37.7 | 29 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 449 | Q3YLA6 | 248 | SRSF1_PIG Serine/arginine-rich splicing facto... | 72 | 0.045 | 37.7 | 29 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 450 | Q6PDM2 | 248 | SRSF1_MOUSE Serine/arginine-rich splicing fac... | 72 | 0.045 | 37.7 | 29 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0050733; F:RS domain binding; IPI:MGI. | | | | | | | | | | GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 451 | Q07955 | 248 | SRSF1_HUMAN Serine/arginine-rich splicing fac... | 72 | 0.045 | 37.7 | 29 | 53 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. |
